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Callithrix jacchus
Homo sapiens
Macaca mulatta
Mus musculus
tissue
assay
Dataset
Organism
Tissue
Disease
Assay
Publication
Cross-species Spinal Cord Atlas: GABAergic
Macaca mulatta
Mus musculus
Homo sapiens
Spinal cord
normal
10x multiome
Consensus Spinal Cord Atlas
Cross-species Spinal Cord Atlas: Cholinergic
Mus musculus
Macaca mulatta
Homo sapiens
Spinal cord
normal
10x multiome
Consensus Spinal Cord Atlas
Cross-species Spinal Cord Atlas: Glutamatergic
Mus musculus
Macaca mulatta
Homo sapiens
Spinal cord
normal
10x multiome
Consensus Spinal Cord Atlas
Cross-species Spinal Cord Atlas
Mus musculus
Macaca mulatta
Homo sapiens
Spinal cord
normal
10x multiome
Consensus Spinal Cord Atlas
Cross-species Spinal Cord Atlas: Non-Neurons
Mus musculus
Macaca mulatta
Homo sapiens
Spinal cord
normal
10x multiome
Consensus Spinal Cord Atlas
CD45 negative cells from human liver dataset
Homo sapiens
liver
normal
10x 3' v3
10x 3' v2
Spatial proteogenomics reveals distinct and evolutionarily conserved hepatic macrophage niches
Lymphoid cells from human liver dataset
Homo sapiens
liver
normal
10x 3' v3
10x 3' v2
Spatial proteogenomics reveals distinct and evolutionarily conserved hepatic macrophage niches
Myeloid cells from human liver dataset
Homo sapiens
liver
normal
10x 3' v2
10x 3' v3
Spatial proteogenomics reveals distinct and evolutionarily conserved hepatic macrophage niches
Concerted changes in the pediatric single-cell intestinal ecosystem before and after anti-TNF blockade
Homo sapiens
ileum
crohns_disease
functional_gastrointestinal_disorder
10x 3' v2
Concerted changes in the pediatric single-cell intestinal ecosystem before and after anti-TNF blockade
An Atlas of Cells in the Human Tonsil
Homo sapiens
palatine tonsil
tonsillitis
10x 3' v3
An Atlas of Cells in the Human Tonsil
human endoderm organoid cell atlas
Homo sapiens
intestine
alveolar sac
lung
pancreas
duodenum
liver
ileum
colon
salivary gland epithelium
intrahepatic bile duct
gallbladder
common bile duct
biliary system
corpus
prostate gland
stomach
bronchus
nasopharynx
thyroid gland
pyloric antrum
normal
10x 3' v3
10x 3' v2
10x 5' v1
10x multiome
SORT-seq
Seq-Well S3
CEL-seq2
Smart-seq
Integrated human endoderm-derived organoids cell atlas (HEOCA)
human lung organoid cell atlas
Homo sapiens
alveolar sac
lung
bronchus
nasopharynx
normal
10x 3' v3
10x 5' v1
10x 3' v2
Integrated human endoderm-derived organoids cell atlas (HEOCA)
snRNA-seq of human optic nerve and optic nerve head - oligodendrocytes
Homo sapiens
cranial nerve II
optic disc
normal
10x 3' v3
Single cell atlas of the human optic nerve
snRNA-seq of human optic nerve and optic nerve head - fibroblasts
Homo sapiens
cranial nerve II
optic disc
normal
10x 3' v3
Single cell atlas of the human optic nerve
snRNA-seq of human optic nerve and optic nerve head - endothelial cells
Homo sapiens
cranial nerve II
optic disc
normal
10x 3' v3
Single cell atlas of the human optic nerve
snRNA-seq of human optic nerve and optic nerve head - all cells
Homo sapiens
cranial nerve II
optic disc
normal
10x 3' v3
Single cell atlas of the human optic nerve
snRNA-seq of human optic nerve and optic nerve head - astrocytes
Homo sapiens
cranial nerve II
optic disc
normal
10x 3' v3
Single cell atlas of the human optic nerve
Skin fibroblasts - Pan-disease fibroblast atlas in skin fibrosis, inflammation, and cancer
Homo sapiens
zone of skin
normal
psoriasis
palmar fibromatosis
systemic sclerosis
keloid
Lyme disease
prurigo nodularis
dermatitis, atopic
cutaneous sclerosis
alopecia areata
basal cell carcinoma
subacute cutaneous lupus erythematosus
sarcoidosis
acne
localized scleroderma
acral lentiginous melanoma
discoid lupus erythematosus
hidradenitis suppurativa
squamous cell carcinoma
drug rash with eosinophilia and systemic symptoms
granuloma annulare
cutaneous melanoma
10x 3' v2
10x 3' v3
10x 5' v2
10x 5' v1
10x 3' v1
Pan-disease fibroblast atlas in skin fibrosis, inflammation, and cancer
Skin fibroblast scRNA-seq atlas in health
Homo sapiens
zone of skin
normal
psoriasis
Lyme disease
palmar fibromatosis
atopic eczema
subacute cutaneous lupus erythematosus
discoid lupus erythematosus
squamous cell carcinoma
10x 3' v2
10x 3' v3
10x 5' v2
10x 5' v1
10x 3' v1
Pan-disease fibroblast atlas in skin fibrosis, inflammation, and cancer
BoneMarrowMap: A Balanced Single-cell Reference Atlas of Human Hematopoiesis
Homo sapiens
bone marrow
normal
10x 3' v2
10x 3' v3
BoneMarrowMap: A Balanced Single-cell Reference Atlas of Human Hematopoiesis
AIDA Phase 1 Data Freeze v2: Chinese, Indian, Japanese, Korean, Malay, and Thai donors in Japan, Singapore, South Korea, Thailand, and India
Homo sapiens
blood
normal
10x 5' v2
Asian Immune Diversity Atlas (AIDA) v2
HMBA Consensus Basal Ganglia Atlas
Homo sapiens
Macaca mulatta
Callithrix jacchus
brain
normal
10x multiome
Human and Mammalian Brain Atlas: Basal Ganglia
HMBA Consensus Basal Ganglia Atlas: Non-neurons
Homo sapiens
Macaca mulatta
Callithrix jacchus
brain
normal
10x multiome
Human and Mammalian Brain Atlas: Basal Ganglia
HMBA Consensus Basal Ganglia Atlas: CN LGE GABA
Homo sapiens
Macaca mulatta
Callithrix jacchus
brain
normal
10x multiome
Human and Mammalian Brain Atlas: Basal Ganglia
HMBA Consensus Basal Ganglia Atlas: Interneurons
Macaca mulatta
Homo sapiens
Callithrix jacchus
brain
normal
10x multiome
Human and Mammalian Brain Atlas: Basal Ganglia
HMBA Consensus Basal Ganglia Atlas: Dopaminergic
Macaca mulatta
Homo sapiens
Callithrix jacchus
brain
normal
10x multiome
Human and Mammalian Brain Atlas: Basal Ganglia
Human liver cell atlas - lymphocyte cells
Homo sapiens
liver
caudate lobe of liver
right lobe of liver
left lobe of liver
normal
10x 3' v3
10x 3' v2
10x 5' v1
An integrated cell atlas of the human liver in health and disease
Human liver cell atlas - cholangiocyte cells
Homo sapiens
liver
caudate lobe of liver
left lobe of liver
right lobe of liver
normal
10x 3' v3
10x 3' v2
10x 5' v1
An integrated cell atlas of the human liver in health and disease
Human liver cell atlas - myeloid cells
Homo sapiens
liver
caudate lobe of liver
right lobe of liver
left lobe of liver
normal
10x 3' v3
10x 3' v2
10x 5' v1
An integrated cell atlas of the human liver in health and disease
Human liver cell atlas - endothelia cells
Homo sapiens
left lobe of liver
right lobe of liver
caudate lobe of liver
liver
normal
10x 3' v3
10x 3' v2
10x 5' v1
An integrated cell atlas of the human liver in health and disease
Found 75 datasets
