Cell Annotation Platform
v2
Local and systemic responses to SARS-CoV-2 infection in children and adults
Local and systemic responses to SARS-CoV-2 infection in children and adults - PBMCs
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Local and systemic responses to SARS-CoV-2 infection in children and adults - PBMCs
Summary
Cell Labels
annotation_detailed_fullNames
T CD4 naive
natural killer cell
Classical monocyte
B naive
T CD4 helper
T CD8 CTL
T CD8 naive
T CD8 central memory
T regulatory
Non-classical monocyte
T CD4 naive IFN stim
Classical monocyte IFN stim
T CD8 effector mem CD45RA+
B non-switched mem
T CD4 CTL
T gamma/delta
B switched memory
MAIT
Cycling
cDC2
T CD8 effector memory
B naive IFN stim
B invariant
Platelets
Plasma cells
pDC
NK IFN stim
Non-classical monocyte complement+
Non-classical monocyte IFN stim
Hematopoietic progenitors
Classical monocyte IL6+
NKT
B non-switched mem IFN stim
innate lymphoid cell
Red blood cells
Plasmablasts
T CD8 CTL IFN stim
cDC1
AS-DC
Basophils & Eosinophils
Hematopoietic progenitors IFN stim
annotation_broad
Feedback Received
NK IFN stim
Ontology Term
natural killer cell
CL:0000623
Synonyms
Terms that have the same, or nearly the same, meaning as the selected cell type.
large granular lymphocyte, null cell, NK cell
Category
Class of which the cell type is a subclass.
group 1 innate lymphoid cell
CL:0001067
Marker Gene Evidence
Gene markers used by researcher to assign this cell annotation.
FCER1G, FCGR3A, GNLY, GZMH, IFI35, IFI44L, IFI6, IFIT3, IRF7, ISG15, MX1, MX2, NCAM1, NCR1, OAS1, OAS2, PRF1, TBX21, TRGV9, CX3CR1
Canonical Marker Genes
unknown
Rationale
NA
Inherited from annotation_detailed_fullNames
Set of Labels Description
Detailed annotation of peripheral blood mononuclear cells from adult and pediatric COVID-19 patients and healthy controls.
Annotation Method
manual
Download Dataset
Molecular Data