Cell Annotation Platform
Home
Datasets
Cell Labels
Blog
Docs
Sign In / Join
Query
organism
Callithrix jacchus
Homo sapiens
Macaca mulatta
Mus musculus
tissue
assay
consortium tags
Dataset
Organism
Tissue
Assay
Cells
Feedback
Whole Mouse Brain Taxonomy, Near and corticothalamic projecting cortical glutamatergic neurons
Mus musculus
neocortex
hippocampal formation
cerebral cortex
olfactory cortex
striatum
dorsal plus ventral thalamus
pallidum
10x 3' v3
10x 3' v2
310,198
0
Whole Mouse Brain Taxonomy, Dentate-Gyrus /immature glutamatergic neurons
Mus musculus
hippocampal formation
olfactory cortex
cerebral cortex
striatum
neocortex
dorsal plus ventral thalamus
midbrain
pallidum
10x 3' v2
10x 3' v3
84,352
0
Whole Mouse Brain Taxonomy, Habenula glutamatergic neurons
Mus musculus
dorsal plus ventral thalamus
midbrain
hypothalamus
striatum
hippocampal formation
10x 3' v2
10x 3' v3
10,770
0
Whole Mouse Brain Taxonomy, Pons neurons
Mus musculus
pons
midbrain
medulla oblongata
hypothalamus
cerebellum
dorsal plus ventral thalamus
10x 3' v2
10x 3' v3
44,995
0
Whole Mouse Brain Taxonomy, Intra-and extratelencephalic projecting cortical glutamatergic neurons
Mus musculus
neocortex
hippocampal formation
olfactory cortex
cerebral cortex
striatum
pallidum
midbrain
hypothalamus
dorsal plus ventral thalamus
pons
10x 3' v3
10x 3' v2
1,095,484
0
Whole Mouse Brain Taxonomy, Medulla neurons
Mus musculus
medulla oblongata
cerebellum
pons
midbrain
hypothalamus
dorsal plus ventral thalamus
neocortex
cerebral cortex
olfactory cortex
10x 3' v2
10x 3' v3
60,075
0
Whole Mouse Brain Taxonomy, non_neuronal
Mus musculus
midbrain
neocortex
medulla oblongata
hippocampal formation
pons
striatum
dorsal plus ventral thalamus
hypothalamus
pallidum
cerebral cortex
olfactory cortex
cerebellum
10x 3' v2
10x 3' v3
1,085,569
0
Whole Mouse Brain Taxonomy, Lateral septal complex GABAergic neurons
Mus musculus
striatum
pallidum
hypothalamus
olfactory cortex
dorsal plus ventral thalamus
neocortex
10x 3' v2
10x 3' v3
30,313
0
Whole Mouse Brain Taxonomy, Pallium GABAergic interneurons
Mus musculus
neocortex
hippocampal formation
cerebral cortex
olfactory cortex
striatum
pallidum
hypothalamus
midbrain
dorsal plus ventral thalamus
pons
10x 3' v2
10x 3' v3
261,117
0
Whole Mouse Brain Taxonomy, Hypothalamic neurons
Mus musculus
hypothalamus
dorsal plus ventral thalamus
pallidum
midbrain
striatum
pons
neocortex
olfactory cortex
cerebral cortex
medulla oblongata
hippocampal formation
10x 3' v2
10x 3' v3
171,281
0
Whole Mouse Brain Taxonomy, Olfactory bulb and Cajal Retzius neurons
Mus musculus
olfactory cortex
hippocampal formation
neocortex
striatum
cerebral cortex
pallidum
dorsal plus ventral thalamus
hypothalamus
midbrain
10x 3' v2
10x 3' v3
4,767
0
Whole Mouse Brain Taxonomy, Thalamic excitatory neurons
Mus musculus
dorsal plus ventral thalamus
hypothalamus
midbrain
pallidum
striatum
hippocampal formation
10x 3' v2
10x 3' v3
115,401
0
Whole Mouse Brain Taxonomy, Cerebral nuclei neurons
Mus musculus
striatum
pallidum
hypothalamus
cerebral cortex
olfactory cortex
neocortex
dorsal plus ventral thalamus
hippocampal formation
midbrain
pons
medulla oblongata
10x 3' v2
10x 3' v3
258,176
0
Whole Mouse Brain Taxonomy, Cerebellar neurons
Mus musculus
cerebellum
medulla oblongata
pons
midbrain
striatum
hypothalamus
10x 3' v2
10x 3' v3
191,986
0
Whole Mouse Brain Taxonomy, Olfactory-bulb/immature GABAergic neurons
Mus musculus
olfactory cortex
striatum
neocortex
cerebral cortex
hippocampal formation
pallidum
dorsal plus ventral thalamus
midbrain
hypothalamus
pons
10x 3' v2
10x 3' v3
107,502
0
Abdominal subcutaneous adipose tissue (Loft et al., 2026, Nature Met)
Homo sapiens
subcutaneous abdominal adipose tissue
10x 3' v3
130,672
0
Subcutaneous, omental, mesenteric, mesocolic, and epiploic adipose tissue (Jalkanen et al., 2026, Cell Met)
Homo sapiens
visceral abdominal adipose tissue
subcutaneous abdominal adipose tissue
10x 3' v3
255,273
0
Single-nucleus transcriptomic profiling of human skeletal muscle from healthy adults
Homo sapiens
gastrocnemius
10x 3' v3
40,769
0
Human Adipose Tissue Atlas v1.0 — Abdominal Subcutaneous WAT
Homo sapiens
subcutaneous abdominal adipose tissue
10x 3' v3
10x 3' v2
10x 3' v4
10x 5' v2
555,527
0
Human Adipose Tissue Atlas v1.0 — Lymphoid cells
Homo sapiens
visceral abdominal adipose tissue
subcutaneous abdominal adipose tissue
subcutaneous adipose tissue
adipose tissue
10x 3' v3
10x 3' v2
10x 3' v4
10x 5' v2
10x multiome
10x 5' v1
49,387
0
Human Adipose Tissue Atlas v1.0 — Mesothelial cells
Homo sapiens
visceral abdominal adipose tissue
subcutaneous abdominal adipose tissue
10x 3' v3
10x 5' v2
118,373
0
Human Adipose Tissue Atlas v1.0 — Vascular cells
Homo sapiens
subcutaneous abdominal adipose tissue
visceral abdominal adipose tissue
subcutaneous adipose tissue
adipose tissue
10x 3' v3
10x 5' v1
10x 3' v2
10x 3' v4
10x 5' v2
10x multiome
210,838
0
Human Adipose Tissue Atlas v1.0 — Abdominal Visceral WAT
Homo sapiens
visceral abdominal adipose tissue
subcutaneous abdominal adipose tissue
10x 3' v3
10x 5' v2
433,708
0
Human Adipose Tissue Atlas v1.0 — Adipocytes
Homo sapiens
subcutaneous abdominal adipose tissue
visceral abdominal adipose tissue
subcutaneous adipose tissue
adipose tissue
10x 3' v3
10x multiome
10x 3' v4
10x 5' v1
10x 3' v2
10x 5' v2
249,354
0
Human Adipose Tissue Atlas v1.0 — Myeloid cells
Homo sapiens
subcutaneous abdominal adipose tissue
visceral abdominal adipose tissue
subcutaneous adipose tissue
adipose tissue
10x 3' v3
10x 3' v2
10x 3' v4
10x 5' v2
10x 5' v1
10x multiome
181,693
0
Human Adipose Tissue Atlas v1.0 — Cervical Subcutaneous WAT
Homo sapiens
subcutaneous adipose tissue
adipose tissue
10x multiome
10x 5' v1
10x 3' v4
10x 3' v3
48,580
0
Human Adipose Tissue Atlas v1.0 — ASPCs
Homo sapiens
subcutaneous abdominal adipose tissue
visceral abdominal adipose tissue
subcutaneous adipose tissue
adipose tissue
10x 3' v3
10x 3' v4
10x 5' v1
10x 3' v2
10x 5' v2
10x multiome
225,219
0
snRNA-seq of the human retinal pigment epithelium and the choroid - retinal pigment epithelial cells
Homo sapiens
chorioretinal region
10x 3' v3
10x 5' v2
69,244
7
snRNA-seq of human of the human retinal pigment epithelium and the choroid - all cells
Homo sapiens
chorioretinal region
10x 3' v3
10x 5' v2
566,546
0
snRNA-seq of the human retinal pigment epithelium and the choroid
Homo sapiens
chorioretinal region
10x 3' v3
10x 5' v2
851,993
0
Found 125 datasets