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Callithrix jacchus
Homo sapiens
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Whole Mouse Brain Taxonomy, Near and corticothalamic projecting cortical glutamatergic neurons
Mus musculus
neocortex
hippocampal formation
cerebral cortex
olfactory cortex
striatum
dorsal plus ventral thalamus
pallidum
10x 3' v3
10x 3' v2
310,198
0
Whole Mouse Brain Taxonomy, Dentate-Gyrus /immature glutamatergic neurons
Mus musculus
hippocampal formation
olfactory cortex
cerebral cortex
striatum
neocortex
dorsal plus ventral thalamus
midbrain
pallidum
10x 3' v2
10x 3' v3
84,352
0
Whole Mouse Brain Taxonomy, Habenula glutamatergic neurons
Mus musculus
dorsal plus ventral thalamus
midbrain
hypothalamus
striatum
hippocampal formation
10x 3' v2
10x 3' v3
10,770
0
Whole Mouse Brain Taxonomy, Pons neurons
Mus musculus
pons
midbrain
medulla oblongata
hypothalamus
cerebellum
dorsal plus ventral thalamus
10x 3' v2
10x 3' v3
44,995
0
Whole Mouse Brain Taxonomy, Intra-and extratelencephalic projecting cortical glutamatergic neurons
Mus musculus
neocortex
hippocampal formation
olfactory cortex
cerebral cortex
striatum
pallidum
midbrain
hypothalamus
dorsal plus ventral thalamus
pons
10x 3' v3
10x 3' v2
1,095,484
0
Whole Mouse Brain Taxonomy, Medulla neurons
Mus musculus
medulla oblongata
cerebellum
pons
midbrain
hypothalamus
dorsal plus ventral thalamus
neocortex
cerebral cortex
olfactory cortex
10x 3' v2
10x 3' v3
60,075
0
Whole Mouse Brain Taxonomy, non_neuronal
Mus musculus
midbrain
neocortex
medulla oblongata
hippocampal formation
pons
striatum
dorsal plus ventral thalamus
hypothalamus
pallidum
cerebral cortex
olfactory cortex
cerebellum
10x 3' v2
10x 3' v3
1,085,569
0
Whole Mouse Brain Taxonomy, Lateral septal complex GABAergic neurons
Mus musculus
striatum
pallidum
hypothalamus
olfactory cortex
dorsal plus ventral thalamus
neocortex
10x 3' v2
10x 3' v3
30,313
0
Whole Mouse Brain Taxonomy, Pallium GABAergic interneurons
Mus musculus
neocortex
hippocampal formation
cerebral cortex
olfactory cortex
striatum
pallidum
hypothalamus
midbrain
dorsal plus ventral thalamus
pons
10x 3' v2
10x 3' v3
261,117
0
Whole Mouse Brain Taxonomy, Hypothalamic neurons
Mus musculus
hypothalamus
dorsal plus ventral thalamus
pallidum
midbrain
striatum
pons
neocortex
olfactory cortex
cerebral cortex
medulla oblongata
hippocampal formation
10x 3' v2
10x 3' v3
171,281
0
Whole Mouse Brain Taxonomy, Olfactory bulb and Cajal Retzius neurons
Mus musculus
olfactory cortex
hippocampal formation
neocortex
striatum
cerebral cortex
pallidum
dorsal plus ventral thalamus
hypothalamus
midbrain
10x 3' v2
10x 3' v3
4,767
0
Whole Mouse Brain Taxonomy, Thalamic excitatory neurons
Mus musculus
dorsal plus ventral thalamus
hypothalamus
midbrain
pallidum
striatum
hippocampal formation
10x 3' v2
10x 3' v3
115,401
0
Whole Mouse Brain Taxonomy, Cerebral nuclei neurons
Mus musculus
striatum
pallidum
hypothalamus
cerebral cortex
olfactory cortex
neocortex
dorsal plus ventral thalamus
hippocampal formation
midbrain
pons
medulla oblongata
10x 3' v2
10x 3' v3
258,176
0
Whole Mouse Brain Taxonomy, Cerebellar neurons
Mus musculus
cerebellum
medulla oblongata
pons
midbrain
striatum
hypothalamus
10x 3' v2
10x 3' v3
191,986
0
Whole Mouse Brain Taxonomy, Olfactory-bulb/immature GABAergic neurons
Mus musculus
olfactory cortex
striatum
neocortex
cerebral cortex
hippocampal formation
pallidum
dorsal plus ventral thalamus
midbrain
hypothalamus
pons
10x 3' v3
10x 3' v2
107,502
0
Abdominal subcutaneous adipose tissue (Loft et al., 2026, Nature Met)
Homo sapiens
subcutaneous abdominal adipose tissue
10x 3' v3
130,672
0
Subcutaneous, omental, mesenteric, mesocolic, and epiploic adipose tissue (Jalkanen et al., 2026, Cell Met)
Homo sapiens
visceral abdominal adipose tissue
subcutaneous abdominal adipose tissue
10x 3' v3
255,273
0
Human Gut Cell Atlas (HGCA) v1 - All Cells
Homo sapiens
ileum
colon
jejunum
gastrointestinal system mesentery
sigmoid colon
transverse colon
duodenum
caecum
rectum
small intestine
descending colon
vermiform appendix
10x 3' v3
10x 3' v2
10x 5' v1
10x 5' v2
10x 5' v3
944,502
0
HCA Gut Cell Atlas v1 Epithelial Lineage
Homo sapiens
ileum
colon
duodenum
transverse colon
sigmoid colon
rectum
jejunum
descending colon
small intestine
caecum
vermiform appendix
10x 3' v3
10x 3' v2
10x 5' v1
10x 5' v2
10X 5' v3
274,859
85
Single-nucleus transcriptomic profiling of human skeletal muscle from healthy adults
Homo sapiens
gastrocnemius
10x 3' v3
40,769
0
HCA Gut Cell Atlas v1 Myeloid Lineage
Homo sapiens
ileum
jejunum
colon
caecum
transverse colon
rectum
sigmoid colon
duodenum
gastrointestinal system mesentery
descending colon
vermiform appendix
small intestine
10x 3' v3
10x 3' v2
10x 5' v1
10x 5' v2
10X 5' v3
52,311
22
HCA Gut Cell Atlas v1 Lymphoid Lineage
Homo sapiens
ileum
jejunum
colon
gastrointestinal system mesentery
caecum
transverse colon
sigmoid colon
duodenum
rectum
small intestine
vermiform appendix
descending colon
10x 3' v3
10x 3' v2
10x 5' v1
10x 5' v2
10X 5' v3
579,238
53
HCA Gut Cell Atlas v1 Stromal Lineage
Homo sapiens
ileum
colon
rectum
sigmoid colon
transverse colon
caecum
jejunum
vermiform appendix
gastrointestinal system mesentery
duodenum
descending colon
small intestine
10x 3' v2
10x 3' v3
10x 5' v1
10x 5' v2
52,881
39
Human Adipose Tissue Atlas v1.0 — Abdominal Subcutaneous WAT
Homo sapiens
subcutaneous abdominal adipose tissue
10x 3' v3
10x 3' v2
10x 3' v4
10x 5' v2
555,527
0
Human Adipose Tissue Atlas v1.0 — Lymphoid cells
Homo sapiens
visceral abdominal adipose tissue
subcutaneous abdominal adipose tissue
subcutaneous adipose tissue
adipose tissue
10x 3' v3
10x 3' v2
10x 3' v4
10x 5' v2
10x multiome
10x 5' v1
49,387
0
Human Adipose Tissue Atlas v1.0 — Mesothelial cells
Homo sapiens
visceral abdominal adipose tissue
subcutaneous abdominal adipose tissue
10x 3' v3
10x 5' v2
118,373
0
Human Adipose Tissue Atlas v1.0 — Vascular cells
Homo sapiens
subcutaneous abdominal adipose tissue
visceral abdominal adipose tissue
subcutaneous adipose tissue
adipose tissue
10x 3' v3
10x 5' v1
10x 3' v2
10x 3' v4
10x 5' v2
10x multiome
210,838
0
Human Adipose Tissue Atlas v1.0 — Abdominal Visceral WAT
Homo sapiens
visceral abdominal adipose tissue
subcutaneous abdominal adipose tissue
10x 3' v3
10x 5' v2
433,708
0
Human Adipose Tissue Atlas v1.0 — Adipocytes
Homo sapiens
subcutaneous abdominal adipose tissue
visceral abdominal adipose tissue
subcutaneous adipose tissue
adipose tissue
10x 3' v3
10x multiome
10x 3' v4
10x 5' v1
10x 3' v2
10x 5' v2
249,354
0
Human Adipose Tissue Atlas v1.0 — Myeloid cells
Homo sapiens
subcutaneous abdominal adipose tissue
visceral abdominal adipose tissue
subcutaneous adipose tissue
adipose tissue
10x 3' v3
10x 3' v2
10x 3' v4
10x 5' v2
10x 5' v1
10x multiome
181,693
0
Found 123 datasets
