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Cell Annotation Platform
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Organism
Tissue
Disease
Assay
Cells
  • Homo sapiens
  • fovea centralis
  • peripheral region of retina
  • chorioretinal region
  • retinal neural layer
  • macula lutea proper
  • normal
  • 10x 3' v2
  • 10x 3' v3
265,767
  • Homo sapiens
  • macula lutea
  • fovea centralis
  • peripheral region of retina
  • macula lutea proper
  • normal
  • 10x 3' v3
399,605
  • Homo sapiens
  • peripheral region of retina
  • macula lutea
  • fovea centralis
  • macula lutea proper
  • normal
  • 10x 3' v3
691,008
  • Homo sapiens
  • peripheral region of retina
  • macula lutea
  • fovea centralis
  • macula lutea proper
  • normal
  • 10x 3' v3
571,579
  • Homo sapiens
  • peripheral region of retina
  • macula lutea
  • fovea centralis
  • macula lutea proper
  • normal
  • 10x 3' v3
3,177,310
  • Homo sapiens
  • fovea centralis
  • peripheral region of retina
  • chorioretinal region
  • retinal neural layer
  • macula lutea proper
  • normal
  • 10x 3' v2
  • 10x 3' v3
72,788
  • Homo sapiens
  • corneo-scleral junction
  • cornea
  • sclera
  • ocular surface region
  • tunica fibrosa of eyeball
  • substantia propria of cornea
  • corneal epithelium
  • corneal endothelium
  • normal
  • 10x 3' v3
  • 10x multiome
  • 10x 3' v2
815,769
  • Homo sapiens
  • cornea
  • corneo-scleral junction
  • sclera
  • normal
  • 10x 3' v3
147,484
  • Homo sapiens
  • ciliary body
  • eye trabecular meshwork
  • uvea
  • normal
  • 10x 3' v3
1,102,250
  • Homo sapiens
  • ciliary body
  • eye trabecular meshwork
  • normal
  • 10x 3' v3
  • 10x 3' v2
  • 10x 5' v2
332,995
  • Homo sapiens
  • chorioretinal region
  • optic choroid
  • eyeball of camera-type eye
  • pigmented layer of retina
  • normal
  • 10x 3' v3
  • 10x 5' v2
  • 10x 3' v2
182,151
  • Homo sapiens
  • chorioretinal region
  • normal
  • 10x 3' v3
  • 10x 5' v2
851,993
  • Homo sapiens
  • telencephalon
  • cerebral cortex
  • brain
  • midbrain tegmentum
  • midbrain tectum
  • arcuate nucleus of hypothalamus
  • ventral part of telencephalon
  • hindbrain
  • choroid plexus
  • cerebellum
  • dorsal plus ventral thalamus
  • normal
  • 10x 3' v3
  • 10x 3' v2
  • Drop-seq
  • 10x multiome
  • BD Rhapsody Whole Transcriptome Analysis
  • SPLiT-seq
  • Quartz-seq
  • Smart-seq2
1,767,674
  • Homo sapiens
  • cortex of kidney
  • renal medulla
  • renal papilla
  • kidney
  • chronic kidney disease
  • normal
  • acute kidney failure
  • 10x 3' v3
304,989
  • Homo sapiens
  • kidney
  • chronic kidney disease
  • acute kidney failure
  • normal
  • 10x 3' v3
225,177
  • Homo sapiens
  • palatine tonsil
  • tonsillitis
  • 10x 3' v3
377,963
  • Homo sapiens
  • ileum
  • crohns_disease
  • functional_gastrointestinal_disorder
  • 10x 3' v2
197,281
  • Homo sapiens
  • intestine
  • duodenum
  • ileum
  • colon
  • normal
  • 10x 3' v3
  • 10x 3' v2
  • 10x 5' v2
  • SORT-seq
  • Seq-Well S3
353,140
  • Homo sapiens
  • intestine
  • alveolar sac
  • lung
  • pancreas
  • duodenum
  • liver
  • ileum
  • colon
  • salivary gland epithelium
  • intrahepatic bile duct
  • gallbladder
  • common bile duct
  • biliary system
  • corpus
  • prostate gland
  • stomach
  • bronchus
  • nasopharynx
  • thyroid gland
  • pyloric antrum
  • normal
  • 10x 3' v3
  • 10x 3' v2
  • 10x 5' v1
  • 10x multiome
  • SORT-seq
  • Seq-Well S3
  • CEL-seq2
  • Smart-seq
806,646
  • Homo sapiens
  • alveolar sac
  • lung
  • bronchus
  • nasopharynx
  • normal
  • 10x 3' v3
  • 10x 5' v1
  • 10x 3' v2
221,425
  • Macaca Mulatta
  • Mus musculus
  • Homo sapiens
  • Spinal cord
  • normal
  • 10x multiome
48,313
  • Mus musculus
  • Macaca Mulatta
  • Homo sapiens
  • Spinal cord
  • normal
  • 10x multiome
57,219
  • Mus musculus
  • Macaca Mulatta
  • Homo sapiens
  • Spinal cord
  • normal
  • 10x multiome
230,825
  • Mus musculus
  • Macaca Mulatta
  • Homo sapiens
  • Spinal cord
  • normal
  • 10x multiome
122,011
  • Mus musculus
  • Macaca Mulatta
  • Homo sapiens
  • Spinal cord
  • normal
  • 10x multiome
3,549
  • Homo sapiens
  • zone of skin
  • normal
  • psoriasis
  • Lyme disease
  • palmar fibromatosis
  • atopic eczema
  • subacute cutaneous lupus erythematosus
  • discoid lupus erythematosus
  • squamous cell carcinoma
  • 10x 3' v2
  • 10x 3' v3
  • 10x 5' v2
  • 10x 5' v1
  • 10x 3' v1
153,546
  • Homo sapiens
  • zone of skin
  • normal
  • psoriasis
  • palmar fibromatosis
  • systemic sclerosis
  • keloid
  • Lyme disease
  • prurigo nodularis
  • dermatitis, atopic
  • cutaneous sclerosis
  • alopecia areata
  • basal cell carcinoma
  • subacute cutaneous lupus erythematosus
  • sarcoidosis
  • acne
  • localized scleroderma
  • acral lentiginous melanoma
  • discoid lupus erythematosus
  • hidradenitis suppurativa
  • squamous cell carcinoma
  • drug rash with eosinophilia and systemic symptoms
  • granuloma annulare
  • cutaneous melanoma
  • 10x 3' v2
  • 10x 3' v3
  • 10x 5' v2
  • 10x 5' v1
  • 10x 3' v1
337,376
  • Homo sapiens
  • liver
  • normal
  • 10x 3' v3
  • 10x 3' v2
167,598
  • Homo sapiens
  • liver
  • normal
  • 10x 3' v3
  • 10x 3' v2
15,481