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Organism
Tissue
Assay
AIDA Phase 1 Data Freeze v2: Chinese, Indian, Japanese, Korean, Malay, and Thai donors in Japan, Singapore, South Korea, Thailand, and India
  • Homo sapiens
  • blood
  • 10x 5' v2
1,265,624
0
Concerted changes in the pediatric single-cell intestinal ecosystem before and after anti-TNF blockade
  • Homo sapiens
  • ileum
  • 10x 3' v2
197,281
0
An Atlas of Cells in the Human Tonsil
  • Homo sapiens
  • palatine tonsil
  • 10x 3' v3
377,963
0
Single cell atlas of the human retina - all cells - scRNA-seq
Human Cell Atlas
  • Homo sapiens
  • fovea centralis
  • peripheral region of retina
  • chorioretinal region
  • retinal neural layer
  • macula lutea proper
  • 10x 3' v2
  • 10x 3' v3
265,767
0
Single cell atlas of the human retina - Bipolar cell subclass - scRNA-seq
Human Cell Atlas
  • Homo sapiens
  • fovea centralis
  • peripheral region of retina
  • chorioretinal region
  • retinal neural layer
  • macula lutea proper
  • 10x 3' v2
  • 10x 3' v3
72,788
0
snRNA-seq of human retina - amacrine cell subset
Human Cell Atlas
  • Homo sapiens
  • peripheral region of retina
  • macula lutea
  • fovea centralis
  • macula lutea proper
  • 10x 3' v3
571,579
2
snRNA-seq of human retina - retinal ganglion cell subset
Human Cell Atlas
  • Homo sapiens
  • macula lutea
  • fovea centralis
  • peripheral region of retina
  • macula lutea proper
  • 10x 3' v3
399,605
1
snRNA-seq of human retina - all cells
Human Cell Atlas
  • Homo sapiens
  • peripheral region of retina
  • macula lutea
  • fovea centralis
  • macula lutea proper
  • 10x 3' v3
3,177,310
0
snRNA-seq of human retina - bipolar cell subset
Human Cell Atlas
  • Homo sapiens
  • peripheral region of retina
  • macula lutea
  • fovea centralis
  • macula lutea proper
  • 10x 3' v3
691,008
0
Single Cell Atlas of Human Ocular Surface snRNA-seq: Cornea, Limbus, Sclera
Human Cell Atlas
  • Homo sapiens
  • cornea
  • corneo-scleral junction
  • sclera
  • 10x 3' v3
147,484
0
Single Cell Atlas of Human Ocular Surface scRNA-seq: Cornea, Limbus, Sclera
Human Cell Atlas
  • Homo sapiens
  • corneo-scleral junction
  • cornea
  • sclera
  • ocular surface region
  • tunica fibrosa of eyeball
  • substantia propria of cornea
  • corneal epithelium
  • corneal endothelium
  • 10x 3' v3
  • 10x multiome
  • 10x 3' v2
815,769
0
Single cell atlas of the human trabecular meshwork and ciliary body - scRNA-seq
Human Cell Atlas
  • Homo sapiens
  • ciliary body
  • eye trabecular meshwork
  • 10x 3' v3
  • 10x 3' v2
  • 10x 5' v2
332,995
0
Single cell atlas of the human trabecular meshwork and ciliary body - snRNA-seq
Human Cell Atlas
  • Homo sapiens
  • ciliary body
  • eye trabecular meshwork
  • uvea
  • 10x 3' v3
1,102,250
0
The Human Neural Organoid Atlas
Human Cell Atlas
  • Homo sapiens
  • telencephalon
  • cerebral cortex
  • brain
  • midbrain tegmentum
  • midbrain tectum
  • arcuate nucleus of hypothalamus
  • ventral part of telencephalon
  • hindbrain
  • choroid plexus
  • cerebellum
  • dorsal plus ventral thalamus
  • 10x 3' v3
  • 10x 3' v2
  • Drop-seq
  • 10x multiome
  • BD Rhapsody Whole Transcriptome Analysis
  • SPLiT-seq
  • Quartz-seq
  • Smart-seq2
1,767,674
0
Single-cell RNA-seq of the Adult Human Kidney (Version 1.5)
  • Homo sapiens
  • kidney
  • 10x 3' v3
225,177
0
Single-nucleus RNA-seq of the Adult Human Kidney (Version 1.5)
  • Homo sapiens
  • cortex of kidney
  • renal medulla
  • renal papilla
  • kidney
  • 10x 3' v3
304,989
0
human endoderm organoid cell atlas
Human Cell Atlas
  • Homo sapiens
  • intestine
  • alveolar sac
  • lung
  • pancreas
  • duodenum
  • liver
  • ileum
  • colon
  • salivary gland epithelium
  • intrahepatic bile duct
  • gallbladder
  • common bile duct
  • biliary system
  • corpus
  • prostate gland
  • stomach
  • bronchus
  • nasopharynx
  • thyroid gland
  • pyloric antrum
  • 10x 3' v3
  • 10x 3' v2
  • 10x 5' v1
  • 10x multiome
  • SORT-seq
  • Seq-Well S3
  • CEL-seq2
  • Smart-seq
806,646
1
human lung organoid cell atlas
Human Cell Atlas
  • Homo sapiens
  • alveolar sac
  • lung
  • bronchus
  • nasopharynx
  • 10x 3' v3
  • 10x 5' v1
  • 10x 3' v2
221,425
0
human intestine organoid cell atlas
Human Cell Atlas
  • Homo sapiens
  • intestine
  • duodenum
  • ileum
  • colon
  • 10x 3' v3
  • 10x 3' v2
  • 10x 5' v2
  • SORT-seq
  • Seq-Well S3
353,140
8
Cross-species Spinal Cord Atlas: Cholinergic
  • Mus musculus
  • Macaca mulatta
  • Homo sapiens
  • Spinal cord
  • 10x multiome
3,549
4
Cross-species Spinal Cord Atlas: GABAergic
  • Macaca mulatta
  • Mus musculus
  • Homo sapiens
  • Spinal cord
  • 10x multiome
48,313
0
Cross-species Spinal Cord Atlas: Glutamatergic
  • Mus musculus
  • Macaca mulatta
  • Homo sapiens
  • Spinal cord
  • 10x multiome
57,219
0
Cross-species Spinal Cord Atlas
  • Mus musculus
  • Macaca mulatta
  • Homo sapiens
  • Spinal cord
  • 10x multiome
230,825
25
Skin fibroblast scRNA-seq atlas in health
  • Homo sapiens
  • zone of skin
  • 10x 3' v2
  • 10x 3' v3
  • 10x 5' v2
  • 10x 5' v1
  • 10x 3' v1
153,546
0
Cross-species Spinal Cord Atlas: Non-Neurons
  • Mus musculus
  • Macaca mulatta
  • Homo sapiens
  • Spinal cord
  • 10x multiome
122,011
0
Lymphoid cells from human liver dataset
  • Homo sapiens
  • liver
  • 10x 3' v3
  • 10x 3' v2
105,790
0
CD45 negative cells from human liver dataset
  • Homo sapiens
  • liver
  • 10x 3' v3
  • 10x 3' v2
15,481
0
Skin fibroblasts - Pan-disease fibroblast atlas in skin fibrosis, inflammation, and cancer
  • Homo sapiens
  • zone of skin
  • 10x 3' v2
  • 10x 3' v3
  • 10x 5' v2
  • 10x 5' v1
  • 10x 3' v1
337,376
0
Myeloid cells from human liver dataset
  • Homo sapiens
  • liver
  • 10x 3' v2
  • 10x 3' v3
40,821
0
All cells from human liver dataset
  • Homo sapiens
  • liver
  • 10x 3' v3
  • 10x 3' v2
167,598
1
Found 120 datasets