Logo
Cell Annotation Platform
HomeDatasetsCell LabelsBlogDocs
Sign In / Join
Explore DatasetsExplore Cell LabelsBlogDocsContact Usv2.12.0
Organism
Tissue
Assay
Whole Mouse Brain Taxonomy, Near and corticothalamic projecting cortical glutamatergic neurons
  • Mus musculus
  • neocortex
  • hippocampal formation
  • cerebral cortex
  • olfactory cortex
  • striatum
  • dorsal plus ventral thalamus
  • pallidum
  • 10x 3' v3
  • 10x 3' v2
310,198
0
Whole Mouse Brain Taxonomy, Dentate-Gyrus /immature glutamatergic neurons
  • Mus musculus
  • hippocampal formation
  • olfactory cortex
  • cerebral cortex
  • striatum
  • neocortex
  • dorsal plus ventral thalamus
  • midbrain
  • pallidum
  • 10x 3' v2
  • 10x 3' v3
84,352
0
Whole Mouse Brain Taxonomy, Habenula glutamatergic neurons
  • Mus musculus
  • dorsal plus ventral thalamus
  • midbrain
  • hypothalamus
  • striatum
  • hippocampal formation
  • 10x 3' v2
  • 10x 3' v3
10,770
0
Whole Mouse Brain Taxonomy, Pons neurons
  • Mus musculus
  • pons
  • midbrain
  • medulla oblongata
  • hypothalamus
  • cerebellum
  • dorsal plus ventral thalamus
  • 10x 3' v2
  • 10x 3' v3
44,995
0
Whole Mouse Brain Taxonomy, Intra-and extratelencephalic projecting cortical glutamatergic neurons
  • Mus musculus
  • neocortex
  • hippocampal formation
  • olfactory cortex
  • cerebral cortex
  • striatum
  • pallidum
  • midbrain
  • hypothalamus
  • dorsal plus ventral thalamus
  • pons
  • 10x 3' v3
  • 10x 3' v2
1,095,484
0
Whole Mouse Brain Taxonomy, Medulla neurons
  • Mus musculus
  • medulla oblongata
  • cerebellum
  • pons
  • midbrain
  • hypothalamus
  • dorsal plus ventral thalamus
  • neocortex
  • cerebral cortex
  • olfactory cortex
  • 10x 3' v2
  • 10x 3' v3
60,075
0
Whole Mouse Brain Taxonomy, non_neuronal
  • Mus musculus
  • midbrain
  • neocortex
  • medulla oblongata
  • hippocampal formation
  • pons
  • striatum
  • dorsal plus ventral thalamus
  • hypothalamus
  • pallidum
  • cerebral cortex
  • olfactory cortex
  • cerebellum
  • 10x 3' v2
  • 10x 3' v3
1,085,569
0
Whole Mouse Brain Taxonomy, Lateral septal complex GABAergic neurons
  • Mus musculus
  • striatum
  • pallidum
  • hypothalamus
  • olfactory cortex
  • dorsal plus ventral thalamus
  • neocortex
  • 10x 3' v2
  • 10x 3' v3
30,313
0
Whole Mouse Brain Taxonomy, Pallium GABAergic interneurons
  • Mus musculus
  • neocortex
  • hippocampal formation
  • cerebral cortex
  • olfactory cortex
  • striatum
  • pallidum
  • hypothalamus
  • midbrain
  • dorsal plus ventral thalamus
  • pons
  • 10x 3' v2
  • 10x 3' v3
261,117
0
Whole Mouse Brain Taxonomy, Hypothalamic neurons
  • Mus musculus
  • hypothalamus
  • dorsal plus ventral thalamus
  • pallidum
  • midbrain
  • striatum
  • pons
  • neocortex
  • olfactory cortex
  • cerebral cortex
  • medulla oblongata
  • hippocampal formation
  • 10x 3' v2
  • 10x 3' v3
171,281
0
Whole Mouse Brain Taxonomy, Olfactory bulb and Cajal Retzius neurons
  • Mus musculus
  • olfactory cortex
  • hippocampal formation
  • neocortex
  • striatum
  • cerebral cortex
  • pallidum
  • dorsal plus ventral thalamus
  • hypothalamus
  • midbrain
  • 10x 3' v2
  • 10x 3' v3
4,767
0
Whole Mouse Brain Taxonomy, Thalamic excitatory neurons
  • Mus musculus
  • dorsal plus ventral thalamus
  • hypothalamus
  • midbrain
  • pallidum
  • striatum
  • hippocampal formation
  • 10x 3' v2
  • 10x 3' v3
115,401
0
Whole Mouse Brain Taxonomy, Cerebral nuclei neurons
  • Mus musculus
  • striatum
  • pallidum
  • hypothalamus
  • cerebral cortex
  • olfactory cortex
  • neocortex
  • dorsal plus ventral thalamus
  • hippocampal formation
  • midbrain
  • pons
  • medulla oblongata
  • 10x 3' v2
  • 10x 3' v3
258,176
0
Whole Mouse Brain Taxonomy, Cerebellar neurons
  • Mus musculus
  • cerebellum
  • medulla oblongata
  • pons
  • midbrain
  • striatum
  • hypothalamus
  • 10x 3' v2
  • 10x 3' v3
191,986
0
Whole Mouse Brain Taxonomy, Olfactory-bulb/immature GABAergic neurons
  • Mus musculus
  • olfactory cortex
  • striatum
  • neocortex
  • cerebral cortex
  • hippocampal formation
  • pallidum
  • dorsal plus ventral thalamus
  • midbrain
  • hypothalamus
  • pons
  • 10x 3' v2
  • 10x 3' v3
107,502
0
Abdominal subcutaneous adipose tissue (Loft et al., 2026, Nature Met)
  • Homo sapiens
  • subcutaneous abdominal adipose tissue
  • 10x 3' v3
130,672
0
Subcutaneous, omental, mesenteric, mesocolic, and epiploic adipose tissue (Jalkanen et al., 2026, Cell Met)
  • Homo sapiens
  • visceral abdominal adipose tissue
  • subcutaneous abdominal adipose tissue
  • 10x 3' v3
255,273
0
Single-nucleus transcriptomic profiling of human skeletal muscle from healthy adults
  • Homo sapiens
  • gastrocnemius
  • 10x 3' v3
40,769
0
Human Adipose Tissue Atlas v1.0 — Abdominal Subcutaneous WAT
Human Cell Atlas
  • Homo sapiens
  • subcutaneous abdominal adipose tissue
  • 10x 3' v3
  • 10x 3' v2
  • 10x 3' v4
  • 10x 5' v2
555,527
0
Human Adipose Tissue Atlas v1.0 — Lymphoid cells
Human Cell Atlas
  • Homo sapiens
  • visceral abdominal adipose tissue
  • subcutaneous abdominal adipose tissue
  • subcutaneous adipose tissue
  • adipose tissue
  • 10x 3' v3
  • 10x 3' v2
  • 10x 3' v4
  • 10x 5' v2
  • 10x multiome
  • 10x 5' v1
49,387
0
Human Adipose Tissue Atlas v1.0 — Mesothelial cells
Human Cell Atlas
  • Homo sapiens
  • visceral abdominal adipose tissue
  • subcutaneous abdominal adipose tissue
  • 10x 3' v3
  • 10x 5' v2
118,373
0
Human Adipose Tissue Atlas v1.0 — Vascular cells
Human Cell Atlas
  • Homo sapiens
  • subcutaneous abdominal adipose tissue
  • visceral abdominal adipose tissue
  • subcutaneous adipose tissue
  • adipose tissue
  • 10x 3' v3
  • 10x 5' v1
  • 10x 3' v2
  • 10x 3' v4
  • 10x 5' v2
  • 10x multiome
210,838
0
Human Adipose Tissue Atlas v1.0 — Abdominal Visceral WAT
Human Cell Atlas
  • Homo sapiens
  • visceral abdominal adipose tissue
  • subcutaneous abdominal adipose tissue
  • 10x 3' v3
  • 10x 5' v2
433,708
0
Human Adipose Tissue Atlas v1.0 — Adipocytes
Human Cell Atlas
  • Homo sapiens
  • subcutaneous abdominal adipose tissue
  • visceral abdominal adipose tissue
  • subcutaneous adipose tissue
  • adipose tissue
  • 10x 3' v3
  • 10x multiome
  • 10x 3' v4
  • 10x 5' v1
  • 10x 3' v2
  • 10x 5' v2
249,354
0
Human Adipose Tissue Atlas v1.0 — Myeloid cells
Human Cell Atlas
  • Homo sapiens
  • subcutaneous abdominal adipose tissue
  • visceral abdominal adipose tissue
  • subcutaneous adipose tissue
  • adipose tissue
  • 10x 3' v3
  • 10x 3' v2
  • 10x 3' v4
  • 10x 5' v2
  • 10x 5' v1
  • 10x multiome
181,693
0
Human Adipose Tissue Atlas v1.0 — Cervical Subcutaneous WAT
Human Cell Atlas
  • Homo sapiens
  • subcutaneous adipose tissue
  • adipose tissue
  • 10x multiome
  • 10x 5' v1
  • 10x 3' v4
  • 10x 3' v3
48,580
0
Human Adipose Tissue Atlas v1.0 — ASPCs
Human Cell Atlas
  • Homo sapiens
  • subcutaneous abdominal adipose tissue
  • visceral abdominal adipose tissue
  • subcutaneous adipose tissue
  • adipose tissue
  • 10x 3' v3
  • 10x 3' v4
  • 10x 5' v1
  • 10x 3' v2
  • 10x 5' v2
  • 10x multiome
225,219
0
snRNA-seq of the human retinal pigment epithelium and the choroid - retinal pigment epithelial cells
Human Cell Atlas
  • Homo sapiens
  • chorioretinal region
  • 10x 3' v3
  • 10x 5' v2
69,244
7
snRNA-seq of human of the human retinal pigment epithelium and the choroid - all cells
Human Cell Atlas
  • Homo sapiens
  • chorioretinal region
  • 10x 3' v3
  • 10x 5' v2
566,546
0
snRNA-seq of the human retinal pigment epithelium and the choroid
Human Cell Atlas
  • Homo sapiens
  • chorioretinal region
  • 10x 3' v3
  • 10x 5' v2
851,993
0
Found 125 datasets