Cell Annotation Platform
Home
Datasets
Cell Labels
Blog
Docs
Sign In / Join
Query
organism
Callithrix jacchus
Homo sapiens
Macaca mulatta
Mus musculus
tissue
assay
consortium tags
Dataset
Organism
Tissue
Assay
Cells
Feedback
Cross-species Spinal Cord Atlas: Cholinergic
Mus musculus
Macaca mulatta
Homo sapiens
Spinal cord
10x multiome
3,549
4
Cross-species Spinal Cord Atlas: Glutamatergic
Mus musculus
Macaca mulatta
Homo sapiens
Spinal cord
10x multiome
57,219
0
Cross-species Spinal Cord Atlas
Mus musculus
Macaca mulatta
Homo sapiens
Spinal cord
10x multiome
230,825
25
Cross-species Spinal Cord Atlas: Non-Neurons
Mus musculus
Macaca mulatta
Homo sapiens
Spinal cord
10x multiome
122,011
0
CD45 negative cells from human liver dataset
Homo sapiens
liver
10x 3' v3
10x 3' v2
15,481
0
Lymphoid cells from human liver dataset
Homo sapiens
liver
10x 3' v3
10x 3' v2
105,790
0
Myeloid cells from human liver dataset
Homo sapiens
liver
10x 3' v2
10x 3' v3
40,821
0
Concerted changes in the pediatric single-cell intestinal ecosystem before and after anti-TNF blockade
Homo sapiens
ileum
10x 3' v2
197,281
0
An Atlas of Cells in the Human Tonsil
Homo sapiens
palatine tonsil
10x 3' v3
377,963
0
snRNA-seq of human optic nerve and optic nerve head - oligodendrocytes
Homo sapiens
cranial nerve II
optic disc
10x 3' v3
278,040
0
Skin fibroblasts - Pan-disease fibroblast atlas in skin fibrosis, inflammation, and cancer
Homo sapiens
zone of skin
10x 3' v2
10x 3' v3
10x 5' v2
10x 5' v1
10x 3' v1
337,376
0
Skin fibroblast scRNA-seq atlas in health
Homo sapiens
zone of skin
10x 3' v2
10x 3' v3
10x 5' v2
10x 5' v1
10x 3' v1
153,546
0
BoneMarrowMap: A Balanced Single-cell Reference Atlas of Human Hematopoiesis
Homo sapiens
bone marrow
10x 3' v2
10x 3' v3
263,159
0
AIDA Phase 1 Data Freeze v2: Chinese, Indian, Japanese, Korean, Malay, and Thai donors in Japan, Singapore, South Korea, Thailand, and India
Homo sapiens
blood
10x 5' v2
1,265,624
0
HMBA Consensus Basal Ganglia Atlas
Homo sapiens
Macaca mulatta
Callithrix jacchus
brain
10x multiome
1,896,133
0
HMBA Consensus Basal Ganglia Atlas: Non-neurons
Homo sapiens
Macaca mulatta
Callithrix jacchus
brain
10x multiome
815,521
0
HMBA Consensus Basal Ganglia Atlas: CN LGE GABA
Homo sapiens
Macaca mulatta
Callithrix jacchus
brain
10x multiome
854,597
4
HMBA Consensus Basal Ganglia Atlas: Interneurons
Macaca mulatta
Homo sapiens
Callithrix jacchus
brain
10x multiome
217,240
0
HMBA Consensus Basal Ganglia Atlas: Dopaminergic
Macaca mulatta
Homo sapiens
Callithrix jacchus
brain
10x multiome
8,775
0
Human lymph node slices cultured with and without ex vivo stimulation by liposomal TLR4 and QS-21 adjuvant
Homo sapiens
cystic lymph node
10x 3' v3
109,297
0
Human lymph nodes with partial T and B cell depletion
Homo sapiens
cystic lymph node
10x 3' v3
77,525
0
Single-nucleus RNA-seq of the Adult Human Kidney (Version 1.5)
Homo sapiens
cortex of kidney
renal medulla
renal papilla
kidney
10x 3' v3
304,989
0
Single-cell RNA-seq of the Adult Human Kidney (Version 1.5)
Homo sapiens
kidney
10x 3' v3
225,177
0
Whole Mouse Brain Taxonomy, Habenula glutamatergic neurons
Mus musculus
dorsal plus ventral thalamus
midbrain
hypothalamus
striatum
hippocampal formation
10x 3' v3
10x 3' v2
10,770
0
Whole Mouse Brain Taxonomy, Medulla neurons
Mus musculus
medulla oblongata
cerebellum
pons
midbrain
hypothalamus
dorsal plus ventral thalamus
neocortex
cerebral cortex
olfactory cortex
10x 3' v2
10x 3' v3
60,075
0
Whole Mouse Brain Taxonomy, non_neuronal
Mus musculus
midbrain
neocortex
medulla oblongata
hippocampal formation
pons
striatum
dorsal plus ventral thalamus
hypothalamus
pallidum
cerebral cortex
olfactory cortex
cerebellum
10x 3' v2
10x 3' v3
1,085,569
0
Whole Mouse Brain Taxonomy, Midbrain neurons
Mus musculus
midbrain
dorsal plus ventral thalamus
pons
hypothalamus
medulla oblongata
cerebellum
pallidum
striatum
hippocampal formation
cerebral cortex
neocortex
10x 3' v2
10x 3' v3
209,303
0
Whole Mouse Brain Taxonomy, Near and corticothalamic projecting cortical glutamatergic neurons
Mus musculus
neocortex
hippocampal formation
cerebral cortex
olfactory cortex
striatum
dorsal plus ventral thalamus
pallidum
10x 3' v3
10x 3' v2
310,198
0
Whole Mouse Brain Taxonomy, Lateral septal complex GABAergic neurons
Mus musculus
striatum
pallidum
hypothalamus
olfactory cortex
dorsal plus ventral thalamus
neocortex
10x 3' v2
10x 3' v3
30,313
0
Whole Mouse Brain Taxonomy, Olfactory-bulb/immature GABAergic neurons
Mus musculus
olfactory cortex
striatum
neocortex
cerebral cortex
hippocampal formation
pallidum
dorsal plus ventral thalamus
hypothalamus
midbrain
pons
10x 3' v2
10x 3' v3
107,502
0
Found 109 datasets