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Skin fibroblasts - Pan-disease fibroblast atlas in skin fibrosis, inflammation, and cancer
Homo sapiens
zone of skin
10x 3' v2
10x 3' v3
10x 5' v2
10x 5' v1
10x 3' v1
337,376
0
Skin fibroblast scRNA-seq atlas in health
Homo sapiens
zone of skin
10x 3' v2
10x 3' v3
10x 5' v2
10x 5' v1
10x 3' v1
153,546
0
Single cell atlas of the human retina - Bipolar cell subclass - scRNA-seq
Homo sapiens
fovea centralis
peripheral region of retina
chorioretinal region
retinal neural layer
macula lutea proper
10x 3' v2
10x 3' v3
72,788
0
snRNA-seq of human retina - all cells
Homo sapiens
peripheral region of retina
macula lutea
fovea centralis
macula lutea proper
10x 3' v3
3,177,310
0
snRNA-seq of human retina - bipolar cell subset
Homo sapiens
peripheral region of retina
macula lutea
fovea centralis
macula lutea proper
10x 3' v3
691,008
0
snRNA-seq of human retina - amacrine cell subset
Homo sapiens
peripheral region of retina
macula lutea
fovea centralis
macula lutea proper
10x 3' v3
571,579
2
snRNA-seq of human retina - retinal ganglion cell subset
Homo sapiens
macula lutea
fovea centralis
peripheral region of retina
macula lutea proper
10x 3' v3
399,605
1
Single cell atlas of the human retina - all cells - scRNA-seq
Homo sapiens
fovea centralis
peripheral region of retina
chorioretinal region
retinal neural layer
macula lutea proper
10x 3' v2
10x 3' v3
265,767
0
AIDA Phase 1 Data Freeze v2: Chinese, Indian, Japanese, Korean, Malay, and Thai donors in Japan, Singapore, South Korea, Thailand, and India
Homo sapiens
blood
10x 5' v2
1,265,624
0
human lung organoid cell atlas
Homo sapiens
alveolar sac
lung
bronchus
nasopharynx
10x 3' v3
10x 5' v1
10x 3' v2
221,425
0
human endoderm organoid cell atlas
Homo sapiens
intestine
alveolar sac
lung
pancreas
duodenum
liver
ileum
colon
salivary gland epithelium
intrahepatic bile duct
gallbladder
common bile duct
biliary system
corpus
prostate gland
stomach
bronchus
nasopharynx
thyroid gland
pyloric antrum
10x 3' v3
10x 3' v2
10x 5' v1
10x multiome
SORT-seq
Seq-Well S3
CEL-seq2
Smart-seq
806,646
0
human intestine organoid cell atlas
Homo sapiens
intestine
duodenum
ileum
colon
10x 3' v3
10x 3' v2
10x 5' v2
SORT-seq
Seq-Well S3
353,140
0
Cross-species Spinal Cord Atlas: Non-Neurons
Mus musculus
Macaca Mulatta
Homo sapiens
Spinal cord
10x multiome
122,011
0
Cross-species Spinal Cord Atlas: Cholinergic
Mus musculus
Macaca Mulatta
Homo sapiens
Spinal cord
10x multiome
3,549
4
Cross-species Spinal Cord Atlas: GABAergic
Macaca Mulatta
Mus musculus
Homo sapiens
Spinal cord
10x multiome
48,313
0
Cross-species Spinal Cord Atlas: Glutamatergic
Mus musculus
Macaca Mulatta
Homo sapiens
Spinal cord
10x multiome
57,219
0
Cross-species Spinal Cord Atlas
Mus musculus
Macaca Mulatta
Homo sapiens
Spinal cord
10x multiome
230,825
25
The Human Neural Organoid Atlas
Homo sapiens
telencephalon
cerebral cortex
brain
midbrain tegmentum
midbrain tectum
arcuate nucleus of hypothalamus
ventral part of telencephalon
hindbrain
choroid plexus
cerebellum
dorsal plus ventral thalamus
10x 3' v3
10x 3' v2
Drop-seq
10x multiome
BD Rhapsody Whole Transcriptome Analysis
SPLiT-seq
Quartz-seq
Smart-seq2
1,767,674
0
BoneMarrowMap: A Balanced Single-cell Reference Atlas of Human Hematopoiesis
Homo sapiens
bone marrow
10x 3' v2
10x 3' v3
263,159
0
snRNA-seq of human optic nerve and optic nerve head - fibroblasts
Homo sapiens
cranial nerve II
optic disc
10x 3' v3
118,925
0
snRNA-seq of human optic nerve and optic nerve head - oligodendrocytes
Homo sapiens
cranial nerve II
optic disc
10x 3' v3
278,040
0
snRNA-seq of human optic nerve and optic nerve head - astrocytes
Homo sapiens
cranial nerve II
optic disc
10x 3' v3
273,711
0
snRNA-seq of human optic nerve and optic nerve head - endothelial cells
Homo sapiens
cranial nerve II
optic disc
10x 3' v3
34,934
0
snRNA-seq of human optic nerve and optic nerve head - all cells
Homo sapiens
cranial nerve II
optic disc
10x 3' v3
959,629
0
Single Cell Atlas of Human Ocular Surface snRNA-seq: Cornea, Limbus, Sclera
Homo sapiens
cornea
corneo-scleral junction
sclera
10x 3' v3
147,484
0
Single Cell Atlas of Human Ocular Surface scRNA-seq: Cornea, Limbus, Sclera
Homo sapiens
corneo-scleral junction
cornea
sclera
ocular surface region
tunica fibrosa of eyeball
substantia propria of cornea
corneal epithelium
corneal endothelium
10x 3' v3
10x multiome
10x 3' v2
815,769
0
Single cell atlas of the human trabecular meshwork and ciliary body - scRNA-seq
Homo sapiens
ciliary body
eye trabecular meshwork
10x 3' v3
10x 3' v2
10x 5' v2
332,995
0
Single cell atlas of the human trabecular meshwork and ciliary body - snRNA-seq
Homo sapiens
ciliary body
eye trabecular meshwork
uvea
10x 3' v3
1,102,250
0
Concerted changes in the pediatric single-cell intestinal ecosystem before and after anti-TNF blockade
Homo sapiens
ileum
10x 3' v2
197,281
0
An integrated cell atlas of the human lung in health and disease (core)
Homo sapiens
lung parenchyma
respiratory airway
nose
10x 3' v2
10x 5' v1
10x 3' v3
10x 5' v2
10x 3' v1
584,944
0
