Cross-species Spinal Cord Atlas: Non-Neurons
Summary
HMBA/AIBS: Cross-species Spinal Cord
Metadata
- Dataset Type
- Single. The file includes a single dataset whereby “dataset” means a single library or a set of technical replicates that can be combined without having to worry about the associated batch effect.
- Total Cells
- 122,011
- organism
- Mus musculus (52,448 cells)Macaca Mulatta (51,656 cells)Homo sapiens (17,907 cells)
- tissue
- Spinal cord
- assay
- 10x multiome
- disease
- normal
- species
- Mouse (52,448 cells)Macaque (51,656 cells)Human (17,907 cells)
- anatomical_region
- Cervical (36,792 cells)Thoracic (35,936 cells)Lumbar (26,490 cells)Sacral (22,713 cells)unknown (80 cells)
- donor_name
- Mouse_1 (52,448 cells)QN24.26.001 (23,086 cells)H20.30.002 (15,686 cells)QN24.26.004 (14,952 cells)QN22.26.011 (4,474 cells)QN22.26.016 (3,566 cells)QN23.26.012 (3,335 cells)QN23.26.001 (2,243 cells)H19.30.003 (1,193 cells)H19.30.001 (1,028 cells)
- spinalcord_dissection
- unknown (70,355 cells)Unbiased (29,257 cells)Ventral_horn (22,399 cells)
- nearest_development_origin
- nan (60,106 cells)dp2 (8,246 cells)FP (8,141 cells)dp3 (7,479 cells)dp6 (6,070 cells)Null_Neuron (4,915 cells)RP (3,898 cells)Null_Progenitor (3,356 cells)dp1 (3,317 cells)pMN (2,780 cells)dp4 (2,262 cells)dp5 (2,051 cells)p3 (1,805 cells)p1 (1,599 cells)p0 (1,070 cells)V2a (955 cells)dl5 (777 cells)p2 (732 cells)V1 (681 cells)V2b (443 cells)Outliers (377 cells)MN (353 cells)dl2 (317 cells)dl3 (131 cells)V0 (72 cells)dl4 (45 cells)dl1 (19 cells)V3 (12 cells)dl6 (2 cells)
Cell Labels
55,417
24,371
22,423
8,968
6,344
2,004
1,593
378
313
200
19,424
18,170
16,136
8,570
5,645
5,202
4,024
3,865
3,858
3,378
2,320
2,262
1,924
1,830
1,761
1,748
1,661
1,568
1,383
1,137
1,053
1,020
954
799
787
703
703
666
647
608
567
490
470
464
443
433
413
402
378
375
355
339
313
291
283
242
217
200
188
187
181
157
156
135
128
103
85
72
71
67
28,359
26,441
24,371
11,844
10,579
8,968
6,344
1,593
1,593
411
378
313
200