Cell Annotation Platform

Getting Started

Creating a Profile Browsing Datasets Downloading Datasets Exploring Cell Labels

Publishing Your Work

Creating Draft Publications and Uploading Datasets Anndata Requirements for Upload Entering Cell Annotation Metadata Collaborating on the Workspace Viewing Cell Relationships Publishing Workspaces

Molecular Data

Molecular Data Page Overview Creating a New Cell Annotation Set Running Differential Expression Using the Heatmap Providing Feedback on Annotations

Background

Glossary Glossary of Cell Annotation Metadata Terms

Creating a Profile

Click Sign In / Join at the top right of the screen.

Home page with sign in highlighted

User accounts can be created with a traditional email/password pair or by logging in with Google or ORCID ID.

The login window

To create a new user profile with email/password login, enter your email address and you will be prompted to provide a password and then click Create Account.

The sign up with email window with password entered

To create a new user profile with Google login, click on Google and select the Google account to sign up with.

Google login demonstration with an example user

To create a new user profile with ORCID login, click on ORCID and select enter your ORCID ID or email for your ORCID account and click Sign in to ORCID.

ORCID login with example credentials

Enter your full name and click Complete Registration.

Enter full name modal populated with an example name

Clicking on your username in the top right hand corner of the page allows you to view your profile page, where you can update your settings and personal information, create new workspaces, and view your existing workspaces/publications. To update your profile information, click Edit Profile.

Full name, contact email and ORCID are required for publishing datasets on CAP. Enter this information and the optional location and lab fields and click Save Profile.