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Blog Posts

2026-01-29T15:53:51.686Z

✨ New Release

Release 2.4.2 is now available - thank you for your patience! This update focuses on making the product smoother, faster, and easier to use. What's improved: This release took longer than expected, and some of you may have experienced issues with uploads or dataset editing along the way. We're sor...

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2025-12-04T17:32:29.887Z

New Publication: The Human Gut Cell Atlas

We are happy to announce that the Human Gut Cell Atlas (HGCA) is now publicly available on CAP. The HGCA brings together the collective expertise of gut biologists, clinicians, and data generators to create a community-driven, healthy reference for the human gut. It integrates 27 datasets representi...

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2025-11-03T13:37:57.185Z

“Tools” Section in Our Documentation

We’ve introduced a new Tools section in our documentation to make it easier to find and use our resources. The Tools section includes: You can visit the Tools section of the CAP documentation to learn more about installation and usage examples.

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2025-11-03T13:37:05.706Z

New Publications: Mouse Brain Atlas and Human Retinal Pigment Epithelium and Choroid v2

We have a new publication on our site: A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain, generated by the Allen Institute for Brain Science. The whole mouse brain atlas includes neuronal and non-neuronal cell types and is a resource for the neuroscience comm...

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2025-10-03T17:57:49.409Z

New Option to Disable Downloads

Owners and admins can now disable the download button for AnnData .h5ad files in both draft and published publications. This feature gives you more control over data sharing, especially for collecting expert feedback on cell annotations for datasets not yet published in scientific journals. Natura...

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2025-10-03T17:52:26.017Z

New Labels Tree View on MD Page

We've added a new Tree View mode to the Molecular Data page, alongside the existing flat list of labelsets. This feature will be particularly useful for 🧠 taxonomies generated by the Allen Institute for Brain Science and the NIH BRAIN Initiative Cell Census Network. If your dataset’s labels are o...

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2025-09-09T07:56:22.668Z

Welcome to the CAP Blog

This is the official blog of the Cell Annotation Platform. Here we will share updates about new datasets, platform features, and improvements. Our goal is to keep the community informed about ongoing developments and provide context around the tools and resources we make available. Stay tuned for th...

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