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An atlas of healthy and injured cell states and niches in the human kidney (Version 1.5)
Single-nucleus RNA-seq of the Adult Human Kidney (Version 1.5)
Single-nucleus RNA-seq of the Adult Human Kidney (Version 1.5)
Main
Summary
Feedback Received
Cell Metadata
subclass.l2
subclass.l1
Summary
The single-nucleus RNA-seq dataset from Lake et al. (2023) Nature.
Metadata
Dataset Type
Integrated. The file includes an integrated collection of datasets.
Total Cells
304,989
organism
Homo sapiens
tissue
cortex of kidney
(201,734 cells)
renal medulla
(84,948 cells)
renal papilla
(17,958 cells)
kidney
(349 cells)
assay
10x 3' v3
disease
chronic kidney disease
(127,996 cells)
normal
(122,444 cells)
acute kidney failure
(54,549 cells)
Cell Labels
subclass.l2 (77)
304,989 cells
aPT
28,396
dPT
21,812
C-TAL
19,237
M-TAL
18,851
PT-S1
13,126
PT-S3
12,731
CCD-PC
11,851
DCT1
10,231
CCD-IC-A
9,852
aTAL1
8,822
CNT
8,375
M-FIB
8,080
EC-PTC
7,567
FIB
7,397
DTL1
6,043
POD
5,862
PT-S2
5,830
DTL2
5,801
MD
5,364
EC-AVR
5,277
dPT/DTL
5,060
OMCD-PC
4,994
IMCD
4,679
dOMCD-PC
4,614
EC-DVR
4,611
EC-GC
4,029
dM-TAL
3,889
T
3,292
PEC
3,273
IC-B
2,986
MAC-M2
2,943
MYOF
2,651
OMCD-IC-A
2,581
VSMC/P
2,543
aFIB
2,480
VSMC
2,283
ATL
2,112
MDC
1,836
CNT-PC
1,770
EC-AEA
1,723
DTL3
1,616
DCT2
1,489
dIMCD
1,414
dATL
1,291
MC
1,228
dC-IC-A
1,181
PL
1,145
B
982
aTAL2
901
dCNT
757
ncMON
705
cycPT
644
NKT
635
tPC-IC
618
dM-FIB
558
dFIB
534
EC-LYM
530
dPOD
526
CNT-IC-A
499
dDTL3
370
PapE
312
dVSMC
279
N
264
MAST
232
cDC
223
dDCT
163
SC/NEU
154
REN
143
cycCNT
134
cycMNP
134
cycEC
123
dC-TAL
111
pDC
83
cycDCT
70
cycMYOF
69
dEC-PTC
15
dEC
3
subclass.l1 (16)
304,989 cells
PT
87,599
TAL
57,175
PC
27,552
EC
23,878
FIB
21,769
IC
17,717
DTL
13,830
IMM
12,474
DCT
11,953
CNT
11,036
VSM/P
6,476
POD
6,388
ATL
3,403
PEC
3,273
PapE
312
NEU
154
Molecular Data
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