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Cross-species Spinal Cord Atlas: GABAergic | CAP
v2
Consensus Spinal Cord Atlas
Cross-species Spinal Cord Atlas: GABAergic
Cross-species Spinal Cord Atlas: GABAergic
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Cell Metadata
Class
Subclass
Group
Cluster
Summary
HMBA/AIBS: Cross-species Spinal Cord
Metadata
Dataset Type
Integrated. The file includes an integrated collection of datasets.
Total Cells
48,313
organism
Macaca mulatta
(24,331 cells)
Mus musculus
(22,403 cells)
Homo sapiens
(1,579 cells)
tissue
Spinal cord
assay
10x multiome
disease
normal
anatomical_region
Lumbar
(13,407 cells)
Sacral
(12,994 cells)
Cervical
(11,412 cells)
Thoracic
(10,289 cells)
unknown
(211 cells)
species
Macaque
(24,331 cells)
Mouse
(22,403 cells)
Human
(1,579 cells)
donor_name
Mouse_1
(22,403 cells)
QN24.26.001
(8,537 cells)
QN24.26.004
(5,667 cells)
QN23.26.012
(3,746 cells)
QN23.26.001
(3,173 cells)
QN22.26.011
(1,917 cells)
H20.30.002
(1,522 cells)
QN22.26.016
(1,291 cells)
H19.30.001
(54 cells)
H19.30.003
(3 cells)
spinalcord_dissection
unknown
(23,982 cells)
Unbiased
(14,238 cells)
Ventral_horn
(10,093 cells)
nearest_development_origin
dl4
(17,197 cells)
V1
(14,244 cells)
nan
(8,413 cells)
V2b
(2,511 cells)
dl6
(1,884 cells)
dl2
(1,336 cells)
dl1
(782 cells)
V3
(446 cells)
Outliers
(419 cells)
V0
(323 cells)
FP
(165 cells)
V2a
(130 cells)
dp3
(98 cells)
dp1
(76 cells)
dp4
(73 cells)
dp6
(47 cells)
Null_Neuron
(37 cells)
dl5
(31 cells)
Null_Progenitor
(22 cells)
pMN
(13 cells)
RP
(12 cells)
p2
(11 cells)
MN
(11 cells)
p3
(9 cells)
dl3
(9 cells)
p0
(7 cells)
dp2
(6 cells)
p1
(1 cells)
Cell Labels
Class
Description
Cell annotation set for Class
Annotation Method
manual
Cell Labels (2)
Cells (48,313)
GABAergic
47,969
GABA-Gluta
344
Subclass
Description
Cell annotation set for Subclass
Annotation Method
manual
Cell Labels (5)
Cells (48,313)
GABA-D
22,101
GABA-V
18,483
GABA-M
6,662
CSF-cNs
723
GABA-Gluta
344
Group
Description
Cell annotation set for Group
Annotation Method
manual
Cell Labels (16)
Cells (48,313)
GABA-V-2
13,474
GABA-M-2
5,628
GABA-V-1
5,009
GABA-Dorsal-1
4,304
GABA-Dorsal-8
3,768
GABA-Dorsal-9
3,498
GABA-Dorsal-2
2,641
GABA-Dorsal-4
2,124
GABA-Dorsal-3
1,620
GABA-Dorsal-7
1,512
GABA-Dorsal-5
1,091
GABA-M-1
1,034
Cluster
Description
Cell annotation set for Cluster
Annotation Method
manual
Cell Labels (93)
Cells (48,313)
231
10,261
199
3,616
30
2,578
51
1,428
211
1,234
180
1,150
234
1,076
90
992
229
973
251
830
29
741
207
709
Molecular Data
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