Cross-species Spinal Cord Atlas: GABAergic

Main

Summary

Feedback Received

Cell Metadata

Summary

HMBA/AIBS: Cross-species Spinal Cord

Metadata

Dataset Type: Integrated. The file includes an integrated collection of datasets.
Total Cells: 48,313
organism: Macaca Mulatta (24,331 cells)Mus musculus (22,403 cells)Homo sapiens (1,579 cells)
tissue: Spinal cord
assay: 10x multiome
disease: normal
anatomical_region: Lumbar (13,407 cells)Sacral (12,994 cells)Cervical (11,412 cells)Thoracic (10,289 cells)unknown (211 cells)
species: Macaque (24,331 cells)Mouse (22,403 cells)Human (1,579 cells)
nearest_development_origin: dl4 (17,197 cells)V1 (14,244 cells)nan (8,413 cells)V2b (2,511 cells)dl6 (1,884 cells)dl2 (1,336 cells)dl1 (782 cells)V3 (446 cells)Outliers (419 cells)V0 (323 cells)FP (165 cells)V2a (130 cells)dp3 (98 cells)dp1 (76 cells)dp4 (73 cells)dp6 (47 cells)Null_Neuron (37 cells)dl5 (31 cells)Null_Progenitor (22 cells)pMN (13 cells)RP (12 cells)MN (11 cells)p2 (11 cells)dl3 (9 cells)p3 (9 cells)p0 (7 cells)dp2 (6 cells)p1 (1 cells)
spinalcord_dissection: unknown (23,982 cells)Unbiased (14,238 cells)Ventral_horn (10,093 cells)
donor_name: Mouse_1 (22,403 cells)QN24.26.001 (8,537 cells)QN24.26.004 (5,667 cells)QN23.26.012 (3,746 cells)QN23.26.001 (3,173 cells)QN22.26.011 (1,917 cells)H20.30.002 (1,522 cells)QN22.26.016 (1,291 cells)H19.30.001 (54 cells)H19.30.003 (3 cells)

Cell Labels

47,969

344

10,261

3,616

2,578

1,428

211

1,234

180

1,150

234

1,076

992

229

973

251

830

741

207

709

680

674

181

636

605

556

555

183

533

523

247

514

266

500

204

481

451

210

432

428

424

410

403

401

374

360

176

353

230

351

349

130

344

197

343

340

322

318

311

310

309

303

300

297

284

282

273

271

264

212

258

253

248

178

236

228

256

222

217

250

211

205

197

196

203

193

188

187

186

185

184

180

174

172

168

168

161

161

156

184

146

145

208

142

267

137

182

128

127

236

126

255

118

214

117

113

112

102

13,474

5,628

5,009

4,304

3,768

3,498

2,641

2,124

1,620

1,512

1,091

1,034

800

743

723

344

22,101

18,483

6,662

723

344

Cross-species Spinal Cord Atlas: GABAergic

Main

Cell Metadata

Summary

HMBA/AIBS: Cross-species Spinal Cord

Metadata

Dataset Type: Integrated. The file includes an integrated collection of datasets.
Total Cells: 48,313
organism: Macaca Mulatta (24,331 cells)Mus musculus (22,403 cells)Homo sapiens (1,579 cells)
tissue: Spinal cord
assay: 10x multiome
disease: normal
anatomical_region: Lumbar (13,407 cells)Sacral (12,994 cells)Cervical (11,412 cells)Thoracic (10,289 cells)unknown (211 cells)
species: Macaque (24,331 cells)Mouse (22,403 cells)Human (1,579 cells)
nearest_development_origin: dl4 (17,197 cells)V1 (14,244 cells)nan (8,413 cells)V2b (2,511 cells)dl6 (1,884 cells)dl2 (1,336 cells)dl1 (782 cells)V3 (446 cells)Outliers (419 cells)V0 (323 cells)FP (165 cells)V2a (130 cells)dp3 (98 cells)dp1 (76 cells)dp4 (73 cells)dp6 (47 cells)Null_Neuron (37 cells)dl5 (31 cells)Null_Progenitor (22 cells)pMN (13 cells)RP (12 cells)MN (11 cells)p2 (11 cells)dl3 (9 cells)p3 (9 cells)p0 (7 cells)dp2 (6 cells)p1 (1 cells)
spinalcord_dissection: unknown (23,982 cells)Unbiased (14,238 cells)Ventral_horn (10,093 cells)
donor_name: Mouse_1 (22,403 cells)QN24.26.001 (8,537 cells)QN24.26.004 (5,667 cells)QN23.26.012 (3,746 cells)QN23.26.001 (3,173 cells)QN22.26.011 (1,917 cells)H20.30.002 (1,522 cells)QN22.26.016 (1,291 cells)H19.30.001 (54 cells)H19.30.003 (3 cells)