Cell Annotation Platform

v1
An atlas of healthy and injured cell states and niches in the human kidney (Version 1.5)
Single-cell RNA-seq of the Adult Human Kidney (Version 1.5)

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An effort by the Villani, Kharchenko, Gehlenborg, Theis, Marioni, and Regev labs.

Single-cell RNA-seq of the Adult Human Kidney (Version 1.5)

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Cell Metadata

author_cell_type

Summary

The single-cell RNA-seq dataset from Lake et al. (2023) Nature.

Metadata

Dataset Type: Integrated. The file includes an integrated collection of datasets.
Total Cells: 225,177
organism: Homo sapiens
tissue: kidney
assay: 10x 3' v3
disease: chronic kidney disease (130,630 cells)acute kidney failure (51,167 cells)normal (43,380 cells)

Cell Labels

author_cell_type plot preview

29,397

21,859

13,019

12,338

9,376

8,855

7,937

7,873

7,217

6,721

5,725

5,552

5,243

5,144

5,114

5,072

4,803

4,780

3,916

3,842

3,798

3,715

3,694

3,592

3,404

3,261

3,171

2,827

2,273

2,211

2,185

1,938

1,665

1,646

1,305

1,254

1,245

1,051

964

903

847

775

527

462

421

376

352

317

299

276

252

191

148

49

subclass.l1 plot preview

53,480

38,384

32,683

19,794

16,914

16,861

13,230

12,927

9,347

6,006

4,311

1,240