mast cell
- SynonymsTerms that have the same, or nearly the same, meaning as the selected cell type.
- mastocyte, histaminocyte, labrocyte, tissue basophil
- CategoryClass of which the cell type is a subclass.
- myeloid leukocyteCL:0000766
- Marker Gene EvidenceGene markers used by researcher to assign this cell annotation.
- KIT, CPA3
- Rationale
- NA
Inherited from cell_type
- Set of Labels Description
- Integrated previously published scRNA-seq and snRNA-seq datasets with newly generated multiome data (paired snRNA-seq and single nucleus assay for transposase-accessible chromatin using sequencing (snATAC-seq)).
- Annotation Method
- both
- Algorithm Name
- scNym
- Algorithm Version
- v0.3
- Algorithm URL
- https://github.com/calico/scnym
- Annotation Transfer Reference
- https://www.nature.com/articles/s41586-020-2797-4
- Annotation Transfer Description
- Litviňuková, M., Talavera-López, C., Maatz, H. et al. Cells of the adult human heart. Nature 588, 466–472 (2020). https://doi.org/10.1038/s41586-020-2797-4
