Single-cell multi-omics analysis of the immune response in COVID-19

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Cell Metadata

T-helper 1 cell

Ontology Term: T-helper 1 cellCL:0000545
SynonymsTerms that have the same, or nearly the same, meaning as the selected cell type.: T(H)-1 cell, Th1 T-lymphocyte, Th1 T-cell, helper T cell type 1, Th1 T lymphocyte, Th1 CD4+ T cell, Th1 cell, Th1 T cell, T helper cells type 1
CategoryClass of which the cell type is a subclass.: CD4-positive helper T cellCL:0000492
Marker Gene EvidenceGene markers used by researcher to assign this cell annotation.: IFNG, TBX21, TNFA
Canonical Marker Genes: unknown
Rationale: NA

Set of Labels Description: Single-cell transcriptome analysis of over 780,000 peripheral blood mononuclear cells from a cross-sectional cohort of 130 patients with varying severities of COVID-19
Annotation Method: both
Algorithm Name: Azimuth
Algorithm Version: v1
Algorithm URL: https://azimuth.hubmapconsortium.org/

Ontology Term: T-helper 1 cellCL:0000545
SynonymsTerms that have the same, or nearly the same, meaning as the selected cell type.: T(H)-1 cell, Th1 T-lymphocyte, Th1 T-cell, helper T cell type 1, Th1 T lymphocyte, Th1 CD4+ T cell, Th1 cell, Th1 T cell, T helper cells type 1
CategoryClass of which the cell type is a subclass.: CD4-positive helper T cellCL:0000492
Marker Gene EvidenceGene markers used by researcher to assign this cell annotation.: IFNG, TBX21, TNFA
Canonical Marker Genes: unknown
Rationale: NA

Set of Labels Description: Single-cell transcriptome analysis of over 780,000 peripheral blood mononuclear cells from a cross-sectional cohort of 130 patients with varying severities of COVID-19
Annotation Method: both
Algorithm Name: Azimuth
Algorithm Version: v1
Algorithm URL: https://azimuth.hubmapconsortium.org/