This cluster expresses CD68, the canonical macrophage marker, as well as several less specific myeloid/granulocyte markers such as LYZ and C1q. It also expresses CD74 and AIF1, which may point to activated macrophages
Inherited from celltype
Set of Labels Description
In this paper we used an automated iterative subclustering algorithm to find hundreds of cell state clusters, after which we merged unsupported clusters and annotated each resulting cluster with a better-known cell subtype. The high-res cell state clusters are annotated as subtype.gene1.gene2, so in some cases we didn't directly name some commonly named subtypes, such as pericytes. When we run DE on the resulting subtypes, we find many canonical and scRNA-suggested marker genes.
