Single-cell multi-omics analysis of the immune response in COVID-19

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Cell Metadata

T follicular helper cell

Ontology Term: T follicular helper cellCL:0002038
SynonymsTerms that have the same, or nearly the same, meaning as the selected cell type.: follicular T cell, Tfh, follicular T-cell, follicular helper T-cell, T(FH), follicular helper T cell, follicular B helper T cell, follicular T-helper cell
CategoryClass of which the cell type is a subclass.: CD4-positive helper T cellCL:0000492
Marker Gene EvidenceGene markers used by researcher to assign this cell annotation.: CD3G, CCR7, CD27, CD4, CD40LG, CXCR5, IL7R
Canonical Marker Genes: unknown
Rationale: NA

Set of Labels Description: Single-cell transcriptome analysis of over 780,000 peripheral blood mononuclear cells from a cross-sectional cohort of 130 patients with varying severities of COVID-19
Annotation Method: both
Algorithm Name: Azimuth
Algorithm Version: v1
Algorithm URL: https://azimuth.hubmapconsortium.org/

Ontology Term: T follicular helper cellCL:0002038
SynonymsTerms that have the same, or nearly the same, meaning as the selected cell type.: follicular T cell, Tfh, follicular T-cell, follicular helper T-cell, T(FH), follicular helper T cell, follicular B helper T cell, follicular T-helper cell
CategoryClass of which the cell type is a subclass.: CD4-positive helper T cellCL:0000492
Marker Gene EvidenceGene markers used by researcher to assign this cell annotation.: CD3G, CCR7, CD27, CD4, CD40LG, CXCR5, IL7R
Canonical Marker Genes: unknown
Rationale: NA

Set of Labels Description: Single-cell transcriptome analysis of over 780,000 peripheral blood mononuclear cells from a cross-sectional cohort of 130 patients with varying severities of COVID-19
Annotation Method: both
Algorithm Name: Azimuth
Algorithm Version: v1
Algorithm URL: https://azimuth.hubmapconsortium.org/