snRNA-seq of human retina - all cells

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Cell Metadata

HAC72

Ontology Term: amacrine cellCL:0000561
SynonymsTerms that have the same, or nearly the same, meaning as the selected cell type.: ACs, AC, amacrine neuron
CategoryClass of which the cell type is a subclass.: GABAergic Glycinergic amacrine cells
Category Closest Ontology Term: amacrine cellCL:0000561
Marker Gene EvidenceGene markers used by researcher to assign this cell annotation.: HKDC1, TF, TRDN, EGF, F3, RLBP1, CPA6, COLEC12, CDH23, RGR
Canonical Marker Genes: unknown
Rationale: 65.8%Unassigned+22.8%Gly2 of the Sanes dataset; 91.3%Gl4 of the macaque dataset; 97.9%Unassigned of the mouse dataset; Known markers are curated from human, macaque, and mouse markers.

Set of Labels Description: This is the initial cell type label for the atlas annotation. These labels will be examined, refined, and updated during the annotation jamboree.
Annotation Method: manual

Ontology Term: amacrine cellCL:0000561
SynonymsTerms that have the same, or nearly the same, meaning as the selected cell type.: ACs, AC, amacrine neuron
CategoryClass of which the cell type is a subclass.: GABAergic Glycinergic amacrine cells
Category Closest Ontology Term: amacrine cellCL:0000561
Marker Gene EvidenceGene markers used by researcher to assign this cell annotation.: HKDC1, TF, TRDN, EGF, F3, RLBP1, CPA6, COLEC12, CDH23, RGR
Canonical Marker Genes: unknown
Rationale: 65.8%Unassigned+22.8%Gly2 of the Sanes dataset; 91.3%Gl4 of the macaque dataset; 97.9%Unassigned of the mouse dataset; Known markers are curated from human, macaque, and mouse markers.

Set of Labels Description: This is the initial cell type label for the atlas annotation. These labels will be examined, refined, and updated during the annotation jamboree.
Annotation Method: manual