snRNA-seq of human retina - all cells

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Cell Metadata

CAI

Ontology Term: GABAergic amacrine cellCL:4030027
SynonymsTerms that have the same, or nearly the same, meaning as the selected cell type.: GABAergic
CategoryClass of which the cell type is a subclass.: amacrine cellCL:0000561
Marker Gene EvidenceGene markers used by researcher to assign this cell annotation.: FGF10, AC007953.2, ITIH5, MIR548XHG, GCH1, DPYD-AS1, U91319.1, MIR137HG, TH, VIPR2
Canonical Marker Genes: TH, CHL1
Rationale: 89.1%Gaba15+10.9%Unassigned of the Sanes dataset; 62.4%Ga26+34.2%Unassigned of the macaque dataset; 72.7%AC51+26.9%Unassigned of the mouse dataset; Known markers are curated from human, macaque, and mouse markers.

Set of Labels Description: This is the initial cell type label for the atlas annotation. These labels will be examined, refined, and updated during the annotation jamboree.
Annotation Method: manual

Ontology Term: GABAergic amacrine cellCL:4030027
SynonymsTerms that have the same, or nearly the same, meaning as the selected cell type.: GABAergic
CategoryClass of which the cell type is a subclass.: amacrine cellCL:0000561
Marker Gene EvidenceGene markers used by researcher to assign this cell annotation.: FGF10, AC007953.2, ITIH5, MIR548XHG, GCH1, DPYD-AS1, U91319.1, MIR137HG, TH, VIPR2
Canonical Marker Genes: TH, CHL1
Rationale: 89.1%Gaba15+10.9%Unassigned of the Sanes dataset; 62.4%Ga26+34.2%Unassigned of the macaque dataset; 72.7%AC51+26.9%Unassigned of the mouse dataset; Known markers are curated from human, macaque, and mouse markers.

Set of Labels Description: This is the initial cell type label for the atlas annotation. These labels will be examined, refined, and updated during the annotation jamboree.
Annotation Method: manual