snRNA-seq of human retina - all cells

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Cell Metadata

HAC65

Ontology Term: amacrine cellCL:0000561
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: ACs, AC, amacrine neuron
Category Class of which the cell type is a subclass.: GABAergic Glycinergic amacrine cells
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: SDC2, AGBL1, CLNK, AL136456.1, AC064875.1, FOXP2, NRP2, KCNH1, CDH6, ADAMTS9-AS2
Canonical Marker Genes: unknown
Rationale: 98.7%Gaba10 of the Sanes dataset; 99.2%Unassigned of the macaque dataset; 97.5%AC20 of the mouse dataset; Known markers are curated from human, macaque, and mouse markers.

Set of Labels Description: This is the initial cell type label for the atlas annotation. These labels will be examined, refined, and updated during the annotation jamboree.
Annotation Method: manual

Ontology Term: amacrine cellCL:0000561
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: ACs, AC, amacrine neuron
Category Class of which the cell type is a subclass.: GABAergic Glycinergic amacrine cells
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: SDC2, AGBL1, CLNK, AL136456.1, AC064875.1, FOXP2, NRP2, KCNH1, CDH6, ADAMTS9-AS2
Canonical Marker Genes: unknown
Rationale: 98.7%Gaba10 of the Sanes dataset; 99.2%Unassigned of the macaque dataset; 97.5%AC20 of the mouse dataset; Known markers are curated from human, macaque, and mouse markers.

Set of Labels Description: This is the initial cell type label for the atlas annotation. These labels will be examined, refined, and updated during the annotation jamboree.
Annotation Method: manual