snRNA-seq of human retina - all cells

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Cell Metadata

HAC80

Ontology Term: amacrine cellCL:0000561
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: ACs, AC, amacrine neuron
Category Class of which the cell type is a subclass.: GABAergic Glycinergic amacrine cells
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: POU3F3, HPGD, LINC02055, PANTR1, GLCE, AC091576.1, NFIB, TAFA4, LINC02197, ST18
Canonical Marker Genes: unknown
Rationale: 75.2%Unassigned+19.4%Gly2 of the Sanes dataset; 58.8%Unassigned+30.3%Ga9 of the macaque dataset; 83.6%Unassigned of the mouse dataset; Known markers are curated from human, macaque, and mouse markers.

Set of Labels Description: This is the initial cell type label for the atlas annotation. These labels will be examined, refined, and updated during the annotation jamboree.
Annotation Method: manual

Ontology Term: amacrine cellCL:0000561
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: ACs, AC, amacrine neuron
Category Class of which the cell type is a subclass.: GABAergic Glycinergic amacrine cells
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: POU3F3, HPGD, LINC02055, PANTR1, GLCE, AC091576.1, NFIB, TAFA4, LINC02197, ST18
Canonical Marker Genes: unknown
Rationale: 75.2%Unassigned+19.4%Gly2 of the Sanes dataset; 58.8%Unassigned+30.3%Ga9 of the macaque dataset; 83.6%Unassigned of the mouse dataset; Known markers are curated from human, macaque, and mouse markers.

Set of Labels Description: This is the initial cell type label for the atlas annotation. These labels will be examined, refined, and updated during the annotation jamboree.
Annotation Method: manual