snRNA-seq of human retina - all cells

Main

Cell Metadata

OFF-SAC

Ontology Term: starburst amacrine cellCL:0004232
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: unknown
Category Class of which the cell type is a subclass.: amacrine cellCL:4030027
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: SH3BP4, WIF1, SLC5A7, TMEM255A, CCDC39, SLC1A3, SLC24A4, SLC35F4, RGS6, LINC01568
Canonical Marker Genes: TENM3
Rationale: 100.0%Gaba5 of the Sanes dataset; 99.9%Ga23 of the macaque dataset; 85.9%Unassigned+14.0%AC17 of the mouse dataset; Known markers are curated from human, macaque, and mouse markers.

Set of Labels Description: This is the initial cell type label for the atlas annotation. These labels will be examined, refined, and updated during the annotation jamboree.
Annotation Method: manual

Main

Cell Metadata

Ontology Term: starburst amacrine cellCL:0004232
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: unknown
Category Class of which the cell type is a subclass.: amacrine cellCL:4030027
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: SH3BP4, WIF1, SLC5A7, TMEM255A, CCDC39, SLC1A3, SLC24A4, SLC35F4, RGS6, LINC01568
Canonical Marker Genes: TENM3
Rationale: 100.0%Gaba5 of the Sanes dataset; 99.9%Ga23 of the macaque dataset; 85.9%Unassigned+14.0%AC17 of the mouse dataset; Known markers are curated from human, macaque, and mouse markers.

Set of Labels Description: This is the initial cell type label for the atlas annotation. These labels will be examined, refined, and updated during the annotation jamboree.
Annotation Method: manual