snRNA-seq of human retina - all cells

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Cell Metadata

HAC38

Ontology Term: GABAergic amacrine cellCL:4030027
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: amacrine cell, GABAergic
Category Class of which the cell type is a subclass.: amacrine cellCL:0000561
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: LRIG3, SCN9A, LINC00511, MAF, CHRNA7, AL109930.1, TAFA2, TSHZ2, SORCS3, SCN1A-AS1
Canonical Marker Genes: unknown
Rationale: 94.2%Gaba4 of the Sanes dataset; 97.1%Ga13 of the macaque dataset; 83.2%Unassigned+16.7%AC41 of the mouse dataset; Known markers are curated from human, macaque, and mouse markers.

Set of Labels Description: This is the initial cell type label for the atlas annotation. These labels will be examined, refined, and updated during the annotation jamboree.
Annotation Method: manual

Ontology Term: GABAergic amacrine cellCL:4030027
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: amacrine cell, GABAergic
Category Class of which the cell type is a subclass.: amacrine cellCL:0000561
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: LRIG3, SCN9A, LINC00511, MAF, CHRNA7, AL109930.1, TAFA2, TSHZ2, SORCS3, SCN1A-AS1
Canonical Marker Genes: unknown
Rationale: 94.2%Gaba4 of the Sanes dataset; 97.1%Ga13 of the macaque dataset; 83.2%Unassigned+16.7%AC41 of the mouse dataset; Known markers are curated from human, macaque, and mouse markers.

Set of Labels Description: This is the initial cell type label for the atlas annotation. These labels will be examined, refined, and updated during the annotation jamboree.
Annotation Method: manual