Cell Annotation
Platform

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snRNA-seq of human retina - all cells

Main

Cell Metadata

Ontology Term: GABAergic amacrine cellCL:4030027
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: amacrine cell, GABAergic
Category Class of which the cell type is a subclass.: amacrine cellCL:0000561
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: AC115622.1, SLC7A2, CLNK, AC013287.1, EYA4, SAMSN1, PCDH10, OTX2, IQCJ-SCHIP1, TJP2
Canonical Marker Genes: unknown
Rationale: 80.9%Unassigned+18.3%Gaba9 of the Sanes dataset; 82.5%Unassigned+12.2%Gl4 of the macaque dataset; 76.4%Unassigned+20.3%AC26 of the mouse dataset; Known markers are curated from human, macaque, and mouse markers.

Set of Labels Description: This is the initial cell type label for the atlas annotation. These labels will be examined, refined, and updated during the annotation jamboree.
Annotation Method: manual