snRNA-seq of human retina - all cells

Main

Cell Metadata

HAC57

Ontology Term: GABAergic amacrine cellCL:4030027
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: amacrine cell, GABAergic
Category Class of which the cell type is a subclass.: amacrine cellCL:0000561
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: EDA, SMOC2, TAC1, NMBR, IL1RAPL2, CLSTN2, AP001825.1, SGCZ, SLC4A4, PTCHD1-AS
Canonical Marker Genes: unknown
Rationale: 72.9%Gaba14+26.5%Unassigned of the Sanes dataset; 97.4%Ga22 of the macaque dataset; 98.2%AC31 of the mouse dataset; Known markers are curated from human, macaque, and mouse markers.

Set of Labels Description: This is the initial cell type label for the atlas annotation. These labels will be examined, refined, and updated during the annotation jamboree.
Annotation Method: manual

Main

Cell Metadata

Ontology Term: GABAergic amacrine cellCL:4030027
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: amacrine cell, GABAergic
Category Class of which the cell type is a subclass.: amacrine cellCL:0000561
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: EDA, SMOC2, TAC1, NMBR, IL1RAPL2, CLSTN2, AP001825.1, SGCZ, SLC4A4, PTCHD1-AS
Canonical Marker Genes: unknown
Rationale: 72.9%Gaba14+26.5%Unassigned of the Sanes dataset; 97.4%Ga22 of the macaque dataset; 98.2%AC31 of the mouse dataset; Known markers are curated from human, macaque, and mouse markers.

Set of Labels Description: This is the initial cell type label for the atlas annotation. These labels will be examined, refined, and updated during the annotation jamboree.
Annotation Method: manual