snRNA-seq of human retina - all cells

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Cell Metadata

MG_ON

Ontology Term: midget ganglion cell of retinaCL:4023188
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: unknown
Category Class of which the cell type is a subclass.: retinal ganglion cellCL:0000740
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: ACSL1, CRNDE, EBF2, ENTPD3, EOMES, KANK4, LINC01697, LRRC52-AS1, SLIT3, SPATC1, ZNF536
Canonical Marker Genes: TPBG
Rationale: 88.0%MG-ON of the Sanes dataset; 99.8%MG_ON of the Shekhar dataset; 57.6%MG_ON+38.5%Unassigned of the macaque dataset; 75.6%21_Tbr1_S2+20.4%Unassigned of the mouse dataset; Known markers are curated from human, macaque, and mouse markers.

Set of Labels Description: This is the initial cell type label for the atlas annotation. These labels will be examined, refined, and updated during the annotation jamboree.
Annotation Method: manual

Ontology Term: midget ganglion cell of retinaCL:4023188
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: unknown
Category Class of which the cell type is a subclass.: retinal ganglion cellCL:0000740
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: ACSL1, CRNDE, EBF2, ENTPD3, EOMES, KANK4, LINC01697, LRRC52-AS1, SLIT3, SPATC1, ZNF536
Canonical Marker Genes: TPBG
Rationale: 88.0%MG-ON of the Sanes dataset; 99.8%MG_ON of the Shekhar dataset; 57.6%MG_ON+38.5%Unassigned of the macaque dataset; 75.6%21_Tbr1_S2+20.4%Unassigned of the mouse dataset; Known markers are curated from human, macaque, and mouse markers.

Set of Labels Description: This is the initial cell type label for the atlas annotation. These labels will be examined, refined, and updated during the annotation jamboree.
Annotation Method: manual