snRNA-seq of human retina - all cells

Main

Cell Metadata

HRGC9

Ontology Term: retinal ganglion cellCL:0000740
SynonymsTerms that have the same, or nearly the same, meaning as the selected cell type.: RGC, ganglion cell of retina, RGCs, gangliocyte
CategoryClass of which the cell type is a subclass.: retinal cellCL:0009004
Marker Gene EvidenceGene markers used by researcher to assign this cell annotation.: NRP1, GRM7, DAPK1, KCNH5, DAPL1, SEMA5A, AK5, NOS1AP, SATB2, SIX3, ANKRD30BL
Canonical Marker Genes: unknown
Rationale: 71.2%Unassigned+25.0%hRGC8 of the Sanes dataset; 78.6%Unassigned+18.4%RGC7 of the Shekhar dataset; 62.8%RGC16+30.6%Unassigned of the macaque dataset; 76.5%19_Novel+19.1%Unassigned of the mouse dataset; Known markers are curated from human, macaque, and mouse markers.

Set of Labels Description: This is the initial cell type label for the atlas annotation. These labels will be examined, refined, and updated during the annotation jamboree.
Annotation Method: manual

Main

Cell Metadata

Ontology Term: retinal ganglion cellCL:0000740
SynonymsTerms that have the same, or nearly the same, meaning as the selected cell type.: RGC, ganglion cell of retina, RGCs, gangliocyte
CategoryClass of which the cell type is a subclass.: retinal cellCL:0009004
Marker Gene EvidenceGene markers used by researcher to assign this cell annotation.: NRP1, GRM7, DAPK1, KCNH5, DAPL1, SEMA5A, AK5, NOS1AP, SATB2, SIX3, ANKRD30BL
Canonical Marker Genes: unknown
Rationale: 71.2%Unassigned+25.0%hRGC8 of the Sanes dataset; 78.6%Unassigned+18.4%RGC7 of the Shekhar dataset; 62.8%RGC16+30.6%Unassigned of the macaque dataset; 76.5%19_Novel+19.1%Unassigned of the mouse dataset; Known markers are curated from human, macaque, and mouse markers.

Set of Labels Description: This is the initial cell type label for the atlas annotation. These labels will be examined, refined, and updated during the annotation jamboree.
Annotation Method: manual