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Human PBMC atlas - T CD8 effector and nonnaive cells and innate lymphoid cells including NK cells | CAP
Human PBMC atlas - T CD8 effector and nonnaive cells and innate lymphoid cells including NK cells
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Summary
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Cell Metadata
Level_4
Level_1
Level_2
Level_3
T CD8 CTL activ NR4A2
Full Name
NR4A2+ activated CD8-positive, alpha-beta cytotoxic T cell
Closest Ontology Term
CD8-positive, alpha-beta cytotoxic T cell
CL:0000794
Synonyms
Terms that have the same, or nearly the same, meaning as the selected cell type.
unknown
Category
Class of which the cell type is a subclass.
CD8-positive, alpha-beta cytotoxic T cell
CL:0000794
Ontology Assessment
Disagreements with any aspect of the Cell Ontology.
Cluster with canonical cytotoxic markers (GZMA & GZMK) in addition to NR4A2 marker of activation
Marker Gene Evidence
Gene markers used by researcher to assign this cell annotation.
NR4A2
Canonical Marker Genes
CD8
,
GZMA
,
GMZH
Rationale
Cluster with canonical cytotoxic markers (GZMA & GZMK) in addition to NR4A2 marker of activation
Rationale DOI
https://doi.org/10.1016/j.coi.2023.102285
Inherited from Level_4
Set of Labels Description
Clustering was Leiden based before manual annotation and consensus agreement by multiple authors.
Annotation Method
manual
v5
Single cell atlas of the human peripheral immune system
Human PBMC atlas - T CD8 effector and nonnaive cells and innate lymphoid cells including NK cells
Molecular Data
