Human PBMC atlas - T CD8 effector and nonnaive cells and innate lymphoid cells including NK cells

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Cell Metadata

T_innate_like

Full Name: innate-like central memory CD8-positive, alpha-beta T cell
Closest Ontology Term: central memory CD8-positive, alpha-beta T cellCL:0000907
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: unknown
Category Class of which the cell type is a subclass.: CD8-positive, alpha-beta memory T cellCL:0000909
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: CD8+ T cell clusters with multiple phenotypes including, gamma-delta T cells, MAIT cells, and NKT cells in addition to innate lymphoid cells
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: unknown
Canonical Marker Genes: CD3D, CD3G, CD8A, CD8B, FCGR3A, NCAM1, TRDV2, TRGV9, TRAV1-2, KIT, TNFRSF18
Rationale: CD8+ T cell clusters with multiple phenotypes including, gamma-delta T cells, MAIT cells, and NKT cells in addition to innate lymphoid cells

Set of Labels Description: Similar clusters with shared features from level 3 were manually merged to one level higher in the hierarchy to determine clustering.
Annotation Method: manual

Full Name: innate-like central memory CD8-positive, alpha-beta T cell
Closest Ontology Term: central memory CD8-positive, alpha-beta T cellCL:0000907
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: unknown
Category Class of which the cell type is a subclass.: CD8-positive, alpha-beta memory T cellCL:0000909
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: CD8+ T cell clusters with multiple phenotypes including, gamma-delta T cells, MAIT cells, and NKT cells in addition to innate lymphoid cells
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: unknown
Canonical Marker Genes: CD3D, CD3G, CD8A, CD8B, FCGR3A, NCAM1, TRDV2, TRGV9, TRAV1-2, KIT, TNFRSF18
Rationale: CD8+ T cell clusters with multiple phenotypes including, gamma-delta T cells, MAIT cells, and NKT cells in addition to innate lymphoid cells

Set of Labels Description: Similar clusters with shared features from level 3 were manually merged to one level higher in the hierarchy to determine clustering.
Annotation Method: manual