Single-cell eQTL mapping identifies cell type specific genetic control of autoimmune disease

Main

Cell Metadata

effector memory CD4-positive, alpha-beta T cell

Ontology Term: effector memory CD4-positive, alpha-beta T cellCL:0000905
SynonymsTerms that have the same, or nearly the same, meaning as the selected cell type.: effector CD4-positive, alpha-beta memory T cell, alpha-beta memory T-cell, alpha-beta memory T lymphocyte, effector memory CD4-positive, alpha-beta T lymphocyte, alpha-beta T-cell, alpha-beta memory T-lymphocyte, alpha-beta T-lymphocyte, effector memory CD4+ T cell
CategoryClass of which the cell type is a subclass.: CD4-positive, alpha-beta memory T cell, CD45RO-positiveCL:0001204
Marker Gene EvidenceGene markers used by researcher to assign this cell annotation.: CD3D, CD4, KLRB1, GZMK, TNFSF13B, IL7R
Canonical Marker Genes: unknown
Rationale: NA

Set of Labels Description: OneK1K cohort, which consists of single-cell RNA sequencing (scRNA-seq) data from 1.27 million peripheral blood mononuclear cells (PMBCs) collected from 982 donors.
Annotation Method: manual

Ontology Term: effector memory CD4-positive, alpha-beta T cellCL:0000905
SynonymsTerms that have the same, or nearly the same, meaning as the selected cell type.: effector CD4-positive, alpha-beta memory T cell, alpha-beta memory T-cell, alpha-beta memory T lymphocyte, effector memory CD4-positive, alpha-beta T lymphocyte, alpha-beta T-cell, alpha-beta memory T-lymphocyte, alpha-beta T-lymphocyte, effector memory CD4+ T cell
CategoryClass of which the cell type is a subclass.: CD4-positive, alpha-beta memory T cell, CD45RO-positiveCL:0001204
Marker Gene EvidenceGene markers used by researcher to assign this cell annotation.: CD3D, CD4, KLRB1, GZMK, TNFSF13B, IL7R
Canonical Marker Genes: unknown
Rationale: NA

Set of Labels Description: OneK1K cohort, which consists of single-cell RNA sequencing (scRNA-seq) data from 1.27 million peripheral blood mononuclear cells (PMBCs) collected from 982 donors.
Annotation Method: manual