snRNA-seq of human retina - retinal ganglion cell subset

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Cell Metadata

HRGC3

Ontology Term: retinal ganglion cellCL:0000740
SynonymsTerms that have the same, or nearly the same, meaning as the selected cell type.: RGC, ganglion cell of retina, RGCs, gangliocyte
CategoryClass of which the cell type is a subclass.: retinal cellCL:0009004
Marker Gene EvidenceGene markers used by researcher to assign this cell annotation.: ATF3, SLC35F2, ARHGAP10, GADD45A, ACVR1, ALDH1A2, ACTN2, ELL2, CREB5, LURAP1L-AS1, HRH1
Canonical Marker Genes: unknown
Rationale: 63.8%MG-ON+31.2%Unassigned of the Sanes dataset; 78.8%Unassigned+11.3%PG_ON of the Shekhar dataset; 70.1%Unassigned+21.9%MG_OFF of the macaque dataset; 62.3%3_FminiON+37.5%Unassigned of the mouse dataset; Known markers are curated from human, macaque, and mouse markers.

Set of Labels Description: A total of 11 retinal ganglion cell clusters were identified from over 399K retinal ganglion cell nuclei in the current atlas. Utilizing previously characterized markers from macaque, 5 clusters can be annotated.
Annotation Method: manual

Ontology Term: retinal ganglion cellCL:0000740
SynonymsTerms that have the same, or nearly the same, meaning as the selected cell type.: RGC, ganglion cell of retina, RGCs, gangliocyte
CategoryClass of which the cell type is a subclass.: retinal cellCL:0009004
Marker Gene EvidenceGene markers used by researcher to assign this cell annotation.: ATF3, SLC35F2, ARHGAP10, GADD45A, ACVR1, ALDH1A2, ACTN2, ELL2, CREB5, LURAP1L-AS1, HRH1
Canonical Marker Genes: unknown
Rationale: 63.8%MG-ON+31.2%Unassigned of the Sanes dataset; 78.8%Unassigned+11.3%PG_ON of the Shekhar dataset; 70.1%Unassigned+21.9%MG_OFF of the macaque dataset; 62.3%3_FminiON+37.5%Unassigned of the mouse dataset; Known markers are curated from human, macaque, and mouse markers.

Set of Labels Description: A total of 11 retinal ganglion cell clusters were identified from over 399K retinal ganglion cell nuclei in the current atlas. Utilizing previously characterized markers from macaque, 5 clusters can be annotated.
Annotation Method: manual