snRNA-seq of human retina - all cells

Main

Cell Metadata

HAC23

Ontology Term: GABAergic amacrine cellCL:4030027
SynonymsTerms that have the same, or nearly the same, meaning as the selected cell type.: amacrine cell, GABAergic
CategoryClass of which the cell type is a subclass.: amacrine cellCL:0000561
Marker Gene EvidenceGene markers used by researcher to assign this cell annotation.: CDH9, XACT, GRIK3, HTR2C, PTH2R, NELL1, SYT10, CBLN2, AL033504.1, SAMD5
Canonical Marker Genes: unknown
Rationale: 59.6%Unassigned+36.7%Gaba10 of the Sanes dataset; 97.7%Unassigned of the macaque dataset; 99.8%AC21 of the mouse dataset; Known markers are curated from human, macaque, and mouse markers.

Set of Labels Description: This is the initial cell type label for the atlas annotation. These labels will be examined, refined, and updated during the annotation jamboree.
Annotation Method: manual

Main

Cell Metadata

Ontology Term: GABAergic amacrine cellCL:4030027
SynonymsTerms that have the same, or nearly the same, meaning as the selected cell type.: amacrine cell, GABAergic
CategoryClass of which the cell type is a subclass.: amacrine cellCL:0000561
Marker Gene EvidenceGene markers used by researcher to assign this cell annotation.: CDH9, XACT, GRIK3, HTR2C, PTH2R, NELL1, SYT10, CBLN2, AL033504.1, SAMD5
Canonical Marker Genes: unknown
Rationale: 59.6%Unassigned+36.7%Gaba10 of the Sanes dataset; 97.7%Unassigned of the macaque dataset; 99.8%AC21 of the mouse dataset; Known markers are curated from human, macaque, and mouse markers.

Set of Labels Description: This is the initial cell type label for the atlas annotation. These labels will be examined, refined, and updated during the annotation jamboree.
Annotation Method: manual