snRNA-seq of human retina - all cells

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Cell Metadata

HAC74

Ontology Term: amacrine cellCL:0000561
SynonymsTerms that have the same, or nearly the same, meaning as the selected cell type.: ACs, AC, amacrine neuron
CategoryClass of which the cell type is a subclass.: GABAergic Glycinergic amacrine cells
Category Closest Ontology Term: amacrine cellCL:0000561
Marker Gene EvidenceGene markers used by researcher to assign this cell annotation.: CRYBG3, GABRA5, NETO1, SAMSN1, AL109930.1, PRDM13, TSHZ2, CDH20, ADGRL2, GRIK1
Canonical Marker Genes: unknown
Rationale: 58.3%Unassigned+24.5%Gly6+16.5%Gly1 of the Sanes dataset; 62.9%Unassigned+35.7%Gl4 of the macaque dataset; 93.2%AC34 of the mouse dataset; Known markers are curated from human, macaque, and mouse markers.

Set of Labels Description: This is the initial cell type label for the atlas annotation. These labels will be examined, refined, and updated during the annotation jamboree.
Annotation Method: manual

Ontology Term: amacrine cellCL:0000561
SynonymsTerms that have the same, or nearly the same, meaning as the selected cell type.: ACs, AC, amacrine neuron
CategoryClass of which the cell type is a subclass.: GABAergic Glycinergic amacrine cells
Category Closest Ontology Term: amacrine cellCL:0000561
Marker Gene EvidenceGene markers used by researcher to assign this cell annotation.: CRYBG3, GABRA5, NETO1, SAMSN1, AL109930.1, PRDM13, TSHZ2, CDH20, ADGRL2, GRIK1
Canonical Marker Genes: unknown
Rationale: 58.3%Unassigned+24.5%Gly6+16.5%Gly1 of the Sanes dataset; 62.9%Unassigned+35.7%Gl4 of the macaque dataset; 93.2%AC34 of the mouse dataset; Known markers are curated from human, macaque, and mouse markers.

Set of Labels Description: This is the initial cell type label for the atlas annotation. These labels will be examined, refined, and updated during the annotation jamboree.
Annotation Method: manual