snRNA-seq of human retina - all cells

Main

Cell Metadata

HAC90

Ontology Term: amacrine cellCL:0000561
SynonymsTerms that have the same, or nearly the same, meaning as the selected cell type.: ACs, AC, amacrine neuron
CategoryClass of which the cell type is a subclass.: GABAergic Glycinergic amacrine cells
Category Closest Ontology Term: amacrine cellCL:0000561
Marker Gene EvidenceGene markers used by researcher to assign this cell annotation.: ATP11C, NECAB1, AC079362.1, IGF2BP2, NCALD, NXPH2, AL109930.1, USH2A, SAG, TSHZ2
Canonical Marker Genes: unknown
Rationale: 98.7%Unassigned of the Sanes dataset; 57.0%Unassigned+38.0%Gl4 of the macaque dataset; 74.7%Unassigned+24.1%AC34 of the mouse dataset; Known markers are curated from human, macaque, and mouse markers.

Set of Labels Description: This is the initial cell type label for the atlas annotation. These labels will be examined, refined, and updated during the annotation jamboree.
Annotation Method: manual

Main

Cell Metadata

Ontology Term: amacrine cellCL:0000561
SynonymsTerms that have the same, or nearly the same, meaning as the selected cell type.: ACs, AC, amacrine neuron
CategoryClass of which the cell type is a subclass.: GABAergic Glycinergic amacrine cells
Category Closest Ontology Term: amacrine cellCL:0000561
Marker Gene EvidenceGene markers used by researcher to assign this cell annotation.: ATP11C, NECAB1, AC079362.1, IGF2BP2, NCALD, NXPH2, AL109930.1, USH2A, SAG, TSHZ2
Canonical Marker Genes: unknown
Rationale: 98.7%Unassigned of the Sanes dataset; 57.0%Unassigned+38.0%Gl4 of the macaque dataset; 74.7%Unassigned+24.1%AC34 of the mouse dataset; Known markers are curated from human, macaque, and mouse markers.

Set of Labels Description: This is the initial cell type label for the atlas annotation. These labels will be examined, refined, and updated during the annotation jamboree.
Annotation Method: manual