Single Cell Atlas of Human Ocular Surface snRNA-seq: Cornea, Limbus, Sclera

Uveal/TM Fibroblasts

Ontology Term

fibroblastCL:0000057

Synonyms

Terms that have the same, or nearly the same, meaning as the selected cell type.

unknown

Category

Class of which the cell type is a subclass.

connective tissue cellCL:0002320

Ontology Assessment

Disagreements with any aspect of the Cell Ontology.

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Marker Gene Evidence

Gene markers used by researcher to assign this cell annotation.

TRPM1, AFF3, PMEL, TYR, PAX3, STK32A, BCL2, ABCB5, SGCD, DLC1

Canonical Marker Genes

DCN, BMP5, EYA1

Rationale

40% FibroX+93.8% Uveal_Fibro from Sanes datasets; majorclass annotated by DCN

Inherited from author_cell_type

Set of Labels Description

This atlas is an integrated collection of over 147k cells, derived from single-nuclei RNA-seq data of human ocular surface, including cornea, limbus, and anterior sclera. These cells have been categorized into 10 major cell classes and 26 types. This is the initial cell type label for the atlas annotation. These labels will be examined, refined, and updated during the annotation jamboree.

Annotation Method

manual