Lymphoid cells from human liver dataset

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Cell Metadata

Plasma cells

Ontology Term: plasma cellCL:0000786
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: plasma B cell
Category Class of which the cell type is a subclass.: antibody secreting cellCL:0000946
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: RP11-731F5.2, JCHAIN, SDC1, IGLL5, TNFRSF17, RP11-16E12.2, MZB1, DERL3, AL928768.3, QPCT
Canonical Marker Genes: JCHAIN
Rationale: Marker genes are top 10 DEGs for this population compared with rest of UMAP (from Table S5 in publication).

Set of Labels Description: Annotation of cell types in dataset based on prior knowledge
Annotation Method: manual

Ontology Term: plasma cellCL:0000786
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: plasma B cell
Category Class of which the cell type is a subclass.: antibody secreting cellCL:0000946
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: RP11-731F5.2, JCHAIN, SDC1, IGLL5, TNFRSF17, RP11-16E12.2, MZB1, DERL3, AL928768.3, QPCT
Canonical Marker Genes: JCHAIN
Rationale: Marker genes are top 10 DEGs for this population compared with rest of UMAP (from Table S5 in publication).

Set of Labels Description: Annotation of cell types in dataset based on prior knowledge
Annotation Method: manual