Lymphoid cells from human liver dataset

Main

Cell Metadata

Circulating NK

Ontology Term: natural killer cellCL:0000623
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: circulating NK cell, NK cell
Category Class of which the cell type is a subclass.: group 1 innate lymphoid cellCL:0001067
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: IGFBP7, AKR1C3, CX3CR1, CHST2, FGFBP2, PRSS23, SH2D1B, FCGR3A, GNLY, CTBP2
Canonical Marker Genes: NCR1, KLRC1
Rationale: Marker genes are top 10 DEGs for this population compared with rest of UMAP (from Table S5 in publication).

Set of Labels Description: Annotation of cell types in dataset based on prior knowledge
Annotation Method: manual

Ontology Term: natural killer cellCL:0000623
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: circulating NK cell, NK cell
Category Class of which the cell type is a subclass.: group 1 innate lymphoid cellCL:0001067
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: IGFBP7, AKR1C3, CX3CR1, CHST2, FGFBP2, PRSS23, SH2D1B, FCGR3A, GNLY, CTBP2
Canonical Marker Genes: NCR1, KLRC1
Rationale: Marker genes are top 10 DEGs for this population compared with rest of UMAP (from Table S5 in publication).

Set of Labels Description: Annotation of cell types in dataset based on prior knowledge
Annotation Method: manual