Lymphoid cells from human liver dataset

Main

Cell Metadata

Cytotoxic CD8+

Ontology Term: cytotoxic T cellCL:0000910
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: unknown
Category Class of which the cell type is a subclass.: effector T cellCL:0000911
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: FGFBP2, CX3CR1, GNLY, ADGRG1, GZMH, C1orf21, ITGB1, GZMB, ZEB2, KLF2
Canonical Marker Genes: GZMB, GZMH, CX3CR1
Rationale: Marker genes are the top 10 DEgs for this population compared with rest of UMAP (from Table S5 in publication).

Set of Labels Description: Annotation of cell types in dataset based on prior knowledge
Annotation Method: manual

Main

Cell Metadata

Ontology Term: cytotoxic T cellCL:0000910
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: unknown
Category Class of which the cell type is a subclass.: effector T cellCL:0000911
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: FGFBP2, CX3CR1, GNLY, ADGRG1, GZMH, C1orf21, ITGB1, GZMB, ZEB2, KLF2
Canonical Marker Genes: GZMB, GZMH, CX3CR1
Rationale: Marker genes are the top 10 DEgs for this population compared with rest of UMAP (from Table S5 in publication).

Set of Labels Description: Annotation of cell types in dataset based on prior knowledge
Annotation Method: manual