CD8 Naive
Ontology Term
- naive thymus-derived CD8-positive, alpha-beta T cellCL:0000900
Synonyms
Terms that have the same, or nearly the same, meaning as the selected cell type.- naive CD8 T cell, Tnaive
Category
Class of which the cell type is a subclass.- CD8-positive, alpha-beta T cellCL:0000625
Ontology Assessment
Disagreements with any aspect of the Cell Ontology.- —
Marker Gene Evidence
Gene markers used by researcher to assign this cell annotation.- CD8A, LEF1, CCR7
Rationale
- Proximity to other CD8 clusters and LEF1 expression allowed me to annotate this ~7k cell sub-cluster found amongst other CD4 clusters as CD8 naive.
Inherited from Prelim annotation
- Set of Labels Description
- Cell annotations (Prelim annotation) are based on the finest possible label that could be used to describe each of the ~500 clusters found during integration and subclustering
- Annotation Method
- both
- Algorithm Name
- scVI
- Algorithm Version
- 1.3.2
- Algorithm URL
- https://github.com/scverse/scvi-tools
