Reinisch MHNO 2025 — abdominal subcutaneous adipose tissue

Main

Cell Metadata

SMCs

Ontology Term: smooth muscle cellCL:0000192
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: SMCs, non-striated muscle cell, myocytes, smooth muscle, smooth muscle fiber
Category Class of which the cell type is a subclass.: muscle cellCL:0000187
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: MYOCD
Canonical Marker Genes: MYOCD
Rationale: Marker genes for each cell population in the human WAT dataset (Fig. 1K of publication). Based on previously described markers from Emont et al.
Rationale DOI: https://doi.org/10.1038/s41586-022-04518-2

Set of Labels Description: Annotation of all broad canonical cell populations present in AT were based on previously described markers from Emont et al (PMID: 35296864).
Annotation Method: manual

Ontology Term: smooth muscle cellCL:0000192
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: SMCs, non-striated muscle cell, myocytes, smooth muscle, smooth muscle fiber
Category Class of which the cell type is a subclass.: muscle cellCL:0000187
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: MYOCD
Canonical Marker Genes: MYOCD
Rationale: Marker genes for each cell population in the human WAT dataset (Fig. 1K of publication). Based on previously described markers from Emont et al.
Rationale DOI: https://doi.org/10.1038/s41586-022-04518-2

Set of Labels Description: Annotation of all broad canonical cell populations present in AT were based on previously described markers from Emont et al (PMID: 35296864).
Annotation Method: manual