Jalkanen 2026 —subcutaneous, omental, mesenteric, mesocolic, and epiploic adipose tissue

Main

Cell Metadata

adipocyte

Ontology Term: adipocyteCL:0000136
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: adipose cell, fat cell
Category Class of which the cell type is a subclass.: connective tissue cellCL:0002320
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: LEP, CSDE1, TNS1, PLIN1, PLIN4, ADIPOQ, SAA1, SAA2, CES1
Canonical Marker Genes: LEP, CSDE1, TNS1, PLIN1, PLIN4, ADIPOQ, SAA1, SAA2, CES1
Rationale: Marker genes for each cell population in the human WAT dataset (Fig. 3b of publication).

Set of Labels Description: Annotation of cell types included in dataset based on prior knowledge & gene expression data from Massier et al (PMID: 36922516).
Annotation Method: manual

Main

Cell Metadata

Ontology Term: adipocyteCL:0000136
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: adipose cell, fat cell
Category Class of which the cell type is a subclass.: connective tissue cellCL:0002320
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: LEP, CSDE1, TNS1, PLIN1, PLIN4, ADIPOQ, SAA1, SAA2, CES1
Canonical Marker Genes: LEP, CSDE1, TNS1, PLIN1, PLIN4, ADIPOQ, SAA1, SAA2, CES1
Rationale: Marker genes for each cell population in the human WAT dataset (Fig. 3b of publication).

Set of Labels Description: Annotation of cell types included in dataset based on prior knowledge & gene expression data from Massier et al (PMID: 36922516).
Annotation Method: manual