Emont 2022 — abdominal subcutaneous and visceral adipose tissue

SMC

Ontology Term

smooth muscle cellCL:0000192

Synonyms

Terms that have the same, or nearly the same, meaning as the selected cell type.

SMCs, non-striated muscle cell, myocytes, smooth muscle, smooth muscle fiber

Category

Class of which the cell type is a subclass.

muscle cellCL:0000187

Ontology Assessment

Disagreements with any aspect of the Cell Ontology.

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Marker Gene Evidence

Gene markers used by researcher to assign this cell annotation.

MYOCD

Canonical Marker Genes

MYOCD

Negative Marker Genes

Genes expected to be absent, or expressed at a notably low level, in these cells, and whose absence supports the assignment of this cell annotation.

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Rationale

Marker genes for each cell population in the human WAT dataset (Fig. 1d of publication).

Inherited from author_cell_type

Set of Labels Description

Annotation of cell types included in dataset based on prior knowledge & gene expression data.

Annotation Method

manual