snRNA-seq of human of the human retinal pigment epithelium and the choroid - all cells

RPE_LGI1+

Ontology Term

retinal pigment epithelial cellCL:0002586

Synonyms

Terms that have the same, or nearly the same, meaning as the selected cell type.

RPE

Category

Class of which the cell type is a subclass.

retinal cellCL:0009004

Ontology Assessment

Disagreements with any aspect of the Cell Ontology.

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Marker Gene Evidence

Gene markers used by researcher to assign this cell annotation.

RPE65, BEST1, LGI1

Canonical Marker Genes

RPE65, BEST1, RGR

Rationale

This RPE LGI1+ cluster was annotatedy by markers RPE65, BEST1, LGI1

Inherited from author_cell_type

Set of Labels Description

This cell annotation dataset focuses on the human retinal pigment epithelium (RPE) and choroid, which are essential for the survival and proper function of the neural retina in the human eye. Using single-nucleus RNA sequencing (snRNA-seq), we analyzed over 566K nuclei from 53 donors.

Annotation Method

both

Algorithm Name

CellTypist

Algorithm Version

v1

Algorithm URL

https://github.com/Teichlab/celltypist