snRNA-seq of human of the human retinal pigment epithelium and the choroid - all cells

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Cell Metadata

Fibroblasts TRDN+

Ontology Term: fibroblastCL:0000057
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: unknown
Category Class of which the cell type is a subclass.: stromal cellCL:0000499
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: PDGFRA, TRDN
Canonical Marker Genes: PDGFRA
Rationale: This fibroblast TRDN+ sub-class was annotatedy by markers PDGFRA, TRDN

Set of Labels Description: This cell annotation dataset focuses on the human retinal pigment epithelium (RPE) and choroid, which are essential for the survival and proper function of the neural retina in the human eye. Using single-nucleus RNA sequencing (snRNA-seq), we analyzed over 566K nuclei from 53 donors.
Annotation Method: both
Algorithm Name: CellTypist
Algorithm Version: v1
Algorithm URL: https://github.com/Teichlab/celltypist

Ontology Term: fibroblastCL:0000057
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: unknown
Category Class of which the cell type is a subclass.: stromal cellCL:0000499
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: PDGFRA, TRDN
Canonical Marker Genes: PDGFRA
Rationale: This fibroblast TRDN+ sub-class was annotatedy by markers PDGFRA, TRDN

Set of Labels Description: This cell annotation dataset focuses on the human retinal pigment epithelium (RPE) and choroid, which are essential for the survival and proper function of the neural retina in the human eye. Using single-nucleus RNA sequencing (snRNA-seq), we analyzed over 566K nuclei from 53 donors.
Annotation Method: both
Algorithm Name: CellTypist
Algorithm Version: v1
Algorithm URL: https://github.com/Teichlab/celltypist