snRNA-seq of human of the human retinal pigment epithelium and the choroid - all cells

Fenestrated capillary

Ontology Term

fenestrated endothelial cellCL:0000666

Synonyms

Terms that have the same, or nearly the same, meaning as the selected cell type.

window cell

Category

Class of which the cell type is a subclass.

blood vessel endothelial cellCL:0000071

Ontology Assessment

Disagreements with any aspect of the Cell Ontology.

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Marker Gene Evidence

Gene markers used by researcher to assign this cell annotation.

CA4, PLVAP

Canonical Marker Genes

CA4, PLVAP

Rationale

This Fenestrated capillary endothelial cells was annotated by the marker CA4, PLVAP

Inherited from author_cell_type

Set of Labels Description

This cell annotation dataset focuses on the human retinal pigment epithelium (RPE) and choroid, which are essential for the survival and proper function of the neural retina in the human eye. Using single-nucleus RNA sequencing (snRNA-seq), we analyzed over 566K nuclei from 53 donors.

Annotation Method

both

Algorithm Name

CellTypist

Algorithm Version

v1

Algorithm URL

https://github.com/Teichlab/celltypist