snRNA-seq of human of the human retinal pigment epithelium and the choroid - all cells

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Cell Metadata

Fenestrated capillary

Ontology Term: fenestrated endothelial cellCL:0000666
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: window cell
Category Class of which the cell type is a subclass.: blood vessel endothelial cellCL:0000071
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: CA4, PLVAP
Canonical Marker Genes: CA4, PLVAP
Rationale: This Fenestrated capillary endothelial cells was annotated by the marker CA4, PLVAP

Set of Labels Description: This cell annotation dataset focuses on the human retinal pigment epithelium (RPE) and choroid, which are essential for the survival and proper function of the neural retina in the human eye. Using single-nucleus RNA sequencing (snRNA-seq), we analyzed over 566K nuclei from 53 donors.
Annotation Method: both
Algorithm Name: CellTypist
Algorithm Version: v1
Algorithm URL: https://github.com/Teichlab/celltypist

Ontology Term: fenestrated endothelial cellCL:0000666
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: window cell
Category Class of which the cell type is a subclass.: blood vessel endothelial cellCL:0000071
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: CA4, PLVAP
Canonical Marker Genes: CA4, PLVAP
Rationale: This Fenestrated capillary endothelial cells was annotated by the marker CA4, PLVAP

Set of Labels Description: This cell annotation dataset focuses on the human retinal pigment epithelium (RPE) and choroid, which are essential for the survival and proper function of the neural retina in the human eye. Using single-nucleus RNA sequencing (snRNA-seq), we analyzed over 566K nuclei from 53 donors.
Annotation Method: both
Algorithm Name: CellTypist
Algorithm Version: v1
Algorithm URL: https://github.com/Teichlab/celltypist