Human PBMC atlas - DC_DC2 cells

pDC_IFN

Full Name

IFN plasmacytoid dendritic cell

Closest Ontology Term

plasmacytoid dendritic cellCL:0000784

Synonyms

Terms that have the same, or nearly the same, meaning as the selected cell type.

unknown

Category

Class of which the cell type is a subclass.

plasmacytoid dendritic cellCL:0000784

Ontology Assessment

Disagreements with any aspect of the Cell Ontology.

Cluster with canonical pDC markers in addition to interferon sensing genes

Marker Gene Evidence

Gene markers used by researcher to assign this cell annotation.

LY6E, IFI6, ISG15, MX1, IFI44L

Canonical Marker Genes

IL3RA, TCF4, IRF7, IRF8, JCHAIN, LILRA4

Rationale

Cluster with canonical pDC markers in addition to interferon sensing genes

Rationale DOI

https://doi.org/10.1126/science.aah4573https://doi.org/10.1016/j.cytogfr.2007.10.006https://doi.org/10.1126/science.aag3009

Inherited from Level_4

Set of Labels Description

Clustering was Leiden based before manual annotation and consensus agreement by multiple authors.

Annotation Method

manual