Human PBMC atlas - HSCs

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Cell Metadata

HSC Specialised

Full Name: specialized hematopoietic oligopotent progenitor cell
Closest Ontology Term: hematopoietic oligopotent progenitor cellCL:0002032
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: unknown
Category Class of which the cell type is a subclass.: hematopoietic precursor cellCL:0008001
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: Cluster expresses canonical markers of megakaryocyte, erythroid and basophil mast progenitor cells
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: LMO4, MS4A2, HDC, CPA3, TPSAB1, GATA1, KLF1, GATA2, EPOR
Canonical Marker Genes: CD34, CD38, GATA2, RUNX1
Rationale: Cluster expresses canonical markers of megakaryocyte, erythroid and basophil mast progenitor cells

Set of Labels Description: Similar clusters with shared features from level 4 were manually merged to one level higher in the hierarchy to determine clustering.
Annotation Method: manual

Full Name: specialized hematopoietic oligopotent progenitor cell
Closest Ontology Term: hematopoietic oligopotent progenitor cellCL:0002032
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: unknown
Category Class of which the cell type is a subclass.: hematopoietic precursor cellCL:0008001
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: Cluster expresses canonical markers of megakaryocyte, erythroid and basophil mast progenitor cells
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: LMO4, MS4A2, HDC, CPA3, TPSAB1, GATA1, KLF1, GATA2, EPOR
Canonical Marker Genes: CD34, CD38, GATA2, RUNX1
Rationale: Cluster expresses canonical markers of megakaryocyte, erythroid and basophil mast progenitor cells

Set of Labels Description: Similar clusters with shared features from level 4 were manually merged to one level higher in the hierarchy to determine clustering.
Annotation Method: manual