Human PBMC atlas - TCD4 naive cells

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Cell Metadata

T CD4 CM Th2 activ FOS_JUN

Full Name: FOS/JUN+ activated T-helper 2 cell
Closest Ontology Term: T-helper 2 cellCL:0000546
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: unknown
Category Class of which the cell type is a subclass.: central memory CD4-positive, alpha-beta T cellCL:0000904
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: Cluster with canonical markers of Th2 cells in addition to FOS/JUN markers of activation
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: FOS, JUN
Canonical Marker Genes: CD4, CCL5, GATA3
Rationale: Cluster with canonical markers of Th2 cells in addition to FOS/JUN markers of activation
Rationale DOI: https://doi.org/10.1186/ar85

Set of Labels Description: Clustering was Leiden based before manual annotation and consensus agreement by multiple authors.
Annotation Method: manual

Full Name: FOS/JUN+ activated T-helper 2 cell
Closest Ontology Term: T-helper 2 cellCL:0000546
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: unknown
Category Class of which the cell type is a subclass.: central memory CD4-positive, alpha-beta T cellCL:0000904
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: Cluster with canonical markers of Th2 cells in addition to FOS/JUN markers of activation
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: FOS, JUN
Canonical Marker Genes: CD4, CCL5, GATA3
Rationale: Cluster with canonical markers of Th2 cells in addition to FOS/JUN markers of activation
Rationale DOI: https://doi.org/10.1186/ar85

Set of Labels Description: Clustering was Leiden based before manual annotation and consensus agreement by multiple authors.
Annotation Method: manual