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v5
Single cell atlas of the human peripheral immune system
Human PBMC atlas - TCD4 naive cells | CAP
Human PBMC atlas - TCD4 naive cells
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Summary
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Cell Metadata
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Human PBMC atlas - TCD4 naive cells
T CD4 naive SOX4 (RTE)
Full Name
CD4+ recent thymic emigrant
Closest Ontology Term
naive thymus-derived CD4-positive, alpha-beta T cell
CL:0000895
Synonyms
Terms that have the same, or nearly the same, meaning as the selected cell type.
unknown
Category
Class of which the cell type is a subclass.
naive thymus-derived CD4-positive, alpha-beta T cell
CL:0000895
Ontology Assessment
Disagreements with any aspect of the Cell Ontology.
RTE have been reported previously, but here we specify between CD4+ and CD8+ types
Marker Gene Evidence
Gene markers used by researcher to assign this cell annotation.
SOX4
Canonical Marker Genes
CD4
,
CCR7
,
SELL
,
LEF1
,
TCF7
Rationale
RTE have been reported previously, but here we specify between CD4+ and CD8+ types
Rationale DOI
https://doi.org/10.1016/j.immuni.2024.08.019
Inherited from Level_4
Set of Labels Description
Clustering was Leiden based before manual annotation and consensus agreement by multiple authors.
Annotation Method
manual
Molecular Data
