Human PBMC atlas - TCD4 effector and nonnaive cells

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Cell Metadata

T CD4 CM Th17 CISH

Full Name: CISH+ T-helper 17 cell
Closest Ontology Term: T-helper 17 cellCL:0000899
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: unknown
Category Class of which the cell type is a subclass.: central memory CD4-positive, alpha-beta T cellCL:0000904
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: Cluster with canonical markers of Th17 cells and CISH+
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: CISH
Canonical Marker Genes: CD4, CCR6, RORC
Rationale: Cluster with canonical markers of Th17 cells and CISH+
Rationale DOI: https://doi.org/10.1084/jem.20150304

Set of Labels Description: Clustering was Leiden based before manual annotation and consensus agreement by multiple authors.
Annotation Method: manual

Full Name: CISH+ T-helper 17 cell
Closest Ontology Term: T-helper 17 cellCL:0000899
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: unknown
Category Class of which the cell type is a subclass.: central memory CD4-positive, alpha-beta T cellCL:0000904
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: Cluster with canonical markers of Th17 cells and CISH+
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: CISH
Canonical Marker Genes: CD4, CCR6, RORC
Rationale: Cluster with canonical markers of Th17 cells and CISH+
Rationale DOI: https://doi.org/10.1084/jem.20150304

Set of Labels Description: Clustering was Leiden based before manual annotation and consensus agreement by multiple authors.
Annotation Method: manual