Human PBMC atlas - TCD4 effector and nonnaive cells

T CD4 EM Th17

Ontology Term

T-helper 17 cellCL:0000899

Synonyms

Terms that have the same, or nearly the same, meaning as the selected cell type.

unknown

Category

Class of which the cell type is a subclass.

effector memory CD4-positive, alpha-beta T cellCL:0000905

Ontology Assessment

Disagreements with any aspect of the Cell Ontology.

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Marker Gene Evidence

Gene markers used by researcher to assign this cell annotation.

unknown

Canonical Marker Genes

CD4, CCR6, RORC

Rationale

Cluster with canonical markers of Th17 cells only

Inherited from Level_4

Set of Labels Description

Clustering was Leiden based before manual annotation and consensus agreement by multiple authors.

Annotation Method

manual