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Human PBMC atlas - plasma cells | CAP
v5
Single cell atlas of the human peripheral immune system
Human PBMC atlas - plasma cells
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Summary
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Cell Metadata
Level_4
Level_1
Level_2
Level_3
Human PBMC atlas - plasma cells
Plasma IgG switched
Ontology Term
IgG plasma cell
CL:0000985
Synonyms
Terms that have the same, or nearly the same, meaning as the selected cell type.
unknown
Category
Class of which the cell type is a subclass.
plasma cell
CL:0000786
Ontology Assessment
Disagreements with any aspect of the Cell Ontology.
—
Marker Gene Evidence
Gene markers used by researcher to assign this cell annotation.
IGHG1
,
IGHG2
,
IGHG3
,
IGHG4
Canonical Marker Genes
MZB1
,
JCHAIN
Negative Marker Genes
Genes expected to be absent, or expressed at a notably low level, in these cells, and whose absence supports the assignment of this cell annotation.
—
Rationale
Cluster expresses canonical IgG plasma cell markers
Inherited from Level_4
Set of Labels Description
Clustering was Leiden based before manual annotation and consensus agreement by multiple authors.
Annotation Method
manual
Molecular Data
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