Healthy and adjacent-to-disease control data from 27 gut single-cell RNAseq datasets were collected and integrated to form v1 of the Human Gut Cell Atlas stromal lineage
- Dataset Type
- Integrated. The file includes an integrated collection of datasets.
- Total Cells
- 52,016
- assay
- 10x 3' v2 (31,162 cells)10x 3' v3 (19,333 cells)10x 5' v1 (1,492 cells)10x 5' v2 (29 cells)
- disease
- normal (33,242 cells)Crohn disease (11,834 cells)colorectal cancer (4,486 cells)digestive system disorder (2,454 cells)
- organism
- Homo sapiens
- tissue
- ileum (24,009 cells)colon (10,359 cells)ascending colon (9,930 cells)rectum (2,295 cells)sigmoid colon (1,947 cells)transverse colon (1,190 cells)caecum (1,173 cells)jejunum (276 cells)vermiform appendix (244 cells)gastrointestinal system mesentery (225 cells)duodenum (223 cells)descending colon (140 cells)small intestine (5 cells)
