Cell Annotation Platform
v1
An integrated transcriptomic cell atlas of human neural organoids
The Human Neural Organoid Atlas
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The Human Neural Organoid Atlas
Main
Summary
Feedback Received
Cell Metadata
cell_type
annot_level_1
annot_level_2
Neuroepithelium
Ontology Term
neuroepithelial stem cell
CL:0002259
Synonyms
Terms that have the same, or nearly the same, meaning as the selected cell type.
unknown
Category
Class of which the cell type is a subclass.
somatic stem cell
CL:0000723
Ontology Assessment
Disagreements with any aspect of the Cell Ontology.
—
Marker Gene Evidence
Gene markers used by researcher to assign this cell annotation.
SOX2
,
NES
Canonical Marker Genes
SOX2
,
NES
Rationale
Cells expressing canonical neuroepithelial cell markers in organoids.
Inherited from annot_level_1
Set of Labels Description
High-level curated cell type annotation of the integrated HNOCA.
Annotation Method
both
Algorithm Name
snapseed
Algorithm Version
0.1.0
Algorithm URL
https://github.com/devsystemslab/snapseed
Molecular Data
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